Preoperative clinical radiomics model based on deep learning in prognostic assessment of patients with gallbladder carcinoma

Abstract

Abstract Objective We aimed to develop a preoperative clinical radiomics survival prediction model based on the radiomics features via deep learning to provide a reference basis for preoperative assessment and treatment decisions for patients with gallbladder carcinoma (GBC). Methods A total of 168 GBC patients who underwent preoperative upper abdominal enhanced CT from one high-volume medical center between January 2011 to December 2020 were retrospectively analyzed. The region of interest (ROI) was manually outlined by two physicians using 3D Slicer software to establish a nnU-Net model. The DeepSurv survival prediction model was developed by combining radiomics features and preoperative clinical variables. Results A total of 1502 radiomics features were extracted from the ROI results based on the nnU-Net model and manual segmentation, and 13 radiomics features were obtained through the 4-step dimensionality reduction methods, respectively. The C-index and AUC of 1-, 2-, and 3-year survival prediction for the nnU-Net based clinical radiomics DeepSurv model was higher than clinical and nnU-Net based radiomics DeepSurv models in the training and testing sets, and close to manual based clinical radiomics DeepSurv model. Delong-test was performed on the AUC of 1-, 2-, and 3-year survival prediction for the two preoperative clinical radiomics DeepSurv prediction models in the testing set, and the results showed that the two models had the same prediction efficiency (all P > 0.05). Conclusions By using the DeepSurv model via nnU-Net segmentation, postoperative survival outcomes for individual gallbladder carcinoma patients could be assessed and stratified, which can provide references for preoperative diagnosis and treatment decisions.