A Genomic Study to Explore the Coping Mechanisms of Bacteria to Hydrocarbon Stress

Author:

Dasgupta Abhisek1

Affiliation:

1. Dibrugarh University

Abstract

Abstract

This study investigated the survival mechanisms of bacteria in a hydrocarbon-enriched environment, focusing on factors such as osmotic stress, biofilm formation, and complex carbohydrate utilization. The whole genome of a bacterial isolate (AR19) capable of degrading benzo[a]pyrene (B[a]P) was sequenced and analyzed. The draft genome size was 3.63 Mb, and the closest reference genome was identified as Bacillus altitudinis. The genome contained 3,777 coding genes. Noteworthy findings from the genome analysis included: (i) the involvement of biofilm and biosurfactant in B[a]P adsorption by AR19, (ii) the utilization of extradiol ring cleavage for B[a]P degradation, and (iii) the importance of osmotic stress protection in maintaining cell structure under hydrocarbon stress. The results of this study have potential implications for the development of bioremediation strategies using ex-situ and in-situ techniques.

Publisher

Research Square Platform LLC

Reference27 articles.

1. Andrews S (2010) FastQC: A Quality Control Tool for High Throughput Sequence Data [Online]. http://www.bioinformatics.babraham.ac.uk/projects/fastqc/

2. KBase: The United States Department of Energy Systems Biology Knowledgebase;Arkin AP;Nat Biotechnol,2018

3. The RAST Server: Rapid Annotations using Subsystems Technology;Aziz RK;BMC Genomics,2008

4. SPAdes: A new genome assembly algorithm and its applications to single-cell sequencing;Bankevich A;J Comput Biol,2012

5. Hydrophobic substances induce water stress in microbial cells;Bhaganna P;Microb Biotechnol,2010

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3