Genome-wide Identification and Bioinformatics Analysis of the UGT Gene Family in Vitis vinifera L

Author:

wenhang Hou1,chongyao Chen1,wei Liu1,na He1,min Tan1,jinyv He1,zhenghai Liu1,zhigang Dong1

Affiliation:

1. Shanxi Agricultural university

Abstract

Abstract UGT (uridine diphosphate glycos-yltransferase) is involved in the process of glycosylation modification and plays an important role in plant growth and development, secondary metabolism and stress response. The aim of this study was to investigate the role of UGT in the biosynthesis of grape secondary metabolites based on the genome-wide identification of grape UGT gene family. Gene family identification, bioinformatics analysis, gene mapping, phylogenetic tree analysis, conservative motif prediction, gene structure and cis-element analysis were performed by using the software. Combined with transcriptome data and KEGG enrichment analysis, genes related to secondary metabolic processes were screened. We identified 181 UGT genes in the grape genome and divided them into 18 subfamilies. Comprehensive analysis showed that fragment duplication events had significant effects on the evolution of VvUGT gene family, and the motif distribution of proteins in the same subfamily was similar Developmental, hormonal, and stress-related cis-elements are enriched in the promoter region. We identified 14 genes in the VvUGT family that may be involved in anthocyanin synthesis. These results provide a theoretical basis for further study on the mechanism of VvUGT gene family regulating the synthesis of plant secondary metabolites.

Publisher

Research Square Platform LLC

Reference35 articles.

1. An evolutionary view of functional diversity in family 1 glycosyltransferases;Yonekura SK;The Plant Journal,2011

2. Genome-wide characterization of the UDP-glycosyltransferase gene family reveals their potential roles in leaf senescence in cotton;Chen Y;International Journal of Biological Macromolecules,2022

3. Glycosyltransferase GT1 family: Phylogenetic distribution, substrates coverage, and representative structural features;Zhang P;Computational and structural biotechnology journal,2020

4. Genome-wide identification, evolution and function analysis of UGTs superfamily in cotton;Sun L;Frontiers in Molecular Biosciences,2022

5. Advances in flavonoid glycosyltransferase research: integrating recent findings with long-term citrus studies;Mcintosh CA;Phytochemistry Reviews,2016

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3