Explainable machine learning model for predicting paratracheal lymph node metastasis in cN0 papillary thyroid cancer

Author:

Chun Lin1,Wang Denghuan2,He Liqiong2,Li Donglun3,Fu Zhiping2,Xue Song4,Su Xinliang1,Zhou Jing5

Affiliation:

1. Department of Breast and Thyroid Surgery, the First Affiliated Hospital of Chongqing Medical University

2. Department of Thyroid and Breast Surgery, Guangyuan Central Hospital,Sichuan

3. Department of Nephrology, University Hospital Essen, University of Duisburg-Essen

4. Intelligent Integrated Circuits and Systems Laboratory (SICS Lab), University of Electronic Science and Technology of China

5. Department of Thyroid and Breast Surgery,Women and Children's Hospital of Chongqing Medical University, Chongqing Health Center for Women and Children

Abstract

Abstract

Prophylactic dissection of the paratracheal lymph nodes in clinical lymph node-negative (cN0) papillary thyroid carcinoma (PTC) remains controversial, as it is difficult to accurately assess the status of the paratracheal lymph nodes preoperatively. This study aimed to construct and validate an interpretable predictive model for paratracheal lymph node metastasis (PLNM) in cN0 PTC using machine learning (ML) methods. We retrospectively selected 3,212 PTC patients treated at the First Affiliated Hospital of Chongqing Medical University from 2016 to 2020. They were randomly divided into the training and test datasets with a 7:3 ratio. The 533 PTC patients treated at the Guangyuan Central Hospital from 2019 to 2022 were used as an external test set. Nine ML models, including XGBoost, were developed. The predictive performance was evaluated using ROC curves, decision curve analysis (DCA), calibration curves, and precision-recall curves. SHapley Additive exPlanations (SHAP) were used to interpret the top 10 predictive features, and a web-based calculator was created. The XGBoost model achieved AUC values of 0.935, 0.857, and 0.775 in the training, validation, and test sets, respectively, significantly outperforming the traditional nomogram model with AUCs of 0.85, 0.844, and 0.769, respectively. SHAP-based visualizations identified the top ten predictive features: prelaryngeal and pretracheal LNMR, tumor size, pretracheal LNMR, prelaryngeal and pretracheal LNM, age, tumor border, pretracheal LNM, pretracheal NLNM, side of position, calcification. These features were used to develop a web-based calculator. ML is a reliable tool for predicting PLNM in cN0 PTC patients. The SHAP method provides valuable insights into the XGBoost model, and the resultant web-based calculator is a clinically useful tool to assist in the surgical planning for paratracheal lymph node dissection.

Publisher

Springer Science and Business Media LLC

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