Identification of drought stress-responsive genes in Korean fir (Abies koreana) through comparative RNA-seq analysis

Author:

Park Hyeong Cheol1,Hwang Jung Eun1

Affiliation:

1. National Institute of Ecology

Abstract

Abstract

Background Abies koreana, an endangered species sensitive to drought, faces severe decline due to climate change-induced water deficit. Results In this study, we performed a comprehensive transcriptomic analysis of A. koreana under drought stress. RNA-seq data analysis revealed 85,403 contigs of extended lengths, indicative of a high-quality assembly. Gene Ontology classification revealed strong drought stress-responsive regulation of unigenes associated with various biological processes, cellular components, and molecular functions. Gene expression levels showed variation at different time points, indicating a nuanced plant response. Numerous transcription factors, notably those belonging to ERF, MYB, LBD, and NAC families, were identified, underscoring their critical roles in drought tolerance. Finally, qRT-PCR validation confirmed the reliability of RNA-seq data. Conclusion Overall, this study reveals candidate genes required for drought tolerance in A. koreana, thus supporting future tree breeding programs for effective forest management.

Publisher

Springer Science and Business Media LLC

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