Genome-wide association mapping and candidate genes analysis of high-throughput image descriptors for wheat frost resistance

Author:

Wu Jianhui1ORCID,Yu Rui2,Liu Yixue2,Yuan Meng2,Jiang Pingtao2,Zhao Jiwen2,Zhang Chuanliang2,Xu Xiaowan3,Wang Qilin2,Wang Yuze2,Chen Tiantian2,Kang Zhensheng2,Zeng Qingdong2,Zhao Yusheng4,Su Baofeng2,Han Dejun2

Affiliation:

1. Northwest Agriculture and Forestry University

2. NWAFU: Northwest A&F University

3. CAAS: Chinese Academy of Agricultural Sciences

4. CAS: Chinese Academy of Sciences

Abstract

Abstract

Frost risk is increasingly occurring in winter wheat. Quantitative assessment of frost risk can facilitate the analysis of key genetic factors related to wheat resistance to abiotic stress. We collected 491 wheat accessions and selected four image-based descriptors (BLUE band, RED band, NDVI, and GNDVI) to quantitatively assess their frost risk. Image descriptors can complement the visual estimation of frost risk. Combined with GWAS, a total of 107 quantitative trait loci (QTL) (r2 ranging from 0.75% to 9.48%) were identified, including the well-known frost-resistant locus Frost Resistance (Fr)-1/ Vernalization (Vrn)-1. Additionally, by utilizing published RNA-Seq data, we identified two other frost resistance candidate genes TraesCS2A03G1077800 and TraesCS5B03G1008500. Furthermore, when combined with genome selection (GS), image-based descriptors can predict frost risk with high accuracy (r≤0.84). In conclusion, our research confirms the accuracy of image-based high-throughput acquisition of frost risk, thereby supplementing the exploration of the genetic structure of frost resistance in wheat within complex field environments.

Publisher

Springer Science and Business Media LLC

Reference60 articles.

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3