Open Genes — A New Comprehensive Database of Human Genes Associated With Aging and Longevity

Author:

Rafikova Ekaterina1ORCID,Nemirovich-Danchenko Nikolay2,Ogmen Anna3,Parfenenkova Anna4,Velikanova Anastasiia1,Tikhonov Stanislav5,Peshkin Leonid6ORCID,Rafikov Konstantin1,Spiridonova Olga1,Belova Yulia1,Glinin Timofey7,Egorova Anastasia1,Batin Mickhail1

Affiliation:

1. Open Longevity

2. National Research Tomsk State University

3. Department of Molecular Biology and Genetics, Bogazici University

4. Saint Petersburg State University University

5. Faculty of Bioengineering and Bioinformatics, Moscow State University

6. Harvard University

7. Department of Surgery, University of California, San Francisco

Abstract

Abstract The Open Genes database was created to enhance and simplify the search for potential aging therapy targets. We collected data on 2402 genes associated with aging and developed convenient tools for searching and comparing gene features. A comprehensive description of genes has been provided, including lifespan-extending interventions, age-related changes, longevity associations, gene evolution, associations with diseases and hallmarks of aging, and functions of gene products. For each experiment, we presented the necessary structured data for evaluating the experiment’s quality and interpreting the study’s findings. Our goal was to stay objective and precise while connecting a particular gene to human aging. We distinguished six types of studies and 12 criteria for adding genes to our database. Genes were classified according to the confidence level of the link between the gene and aging. All the data collected in a database are provided both by an API and a user interface. The database is publicly available on a website at https://open-genes.org/.

Publisher

Research Square Platform LLC

Reference34 articles.

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