Identification of a Novel Macrophage-Related Prognostic Signature in Colorectal cancer

Author:

Lin Dongfa1,Zheng Tingjin2,Huang Shangyuan3,Hua Shuang4,Liu Rui1,Guan Shuwen1,Zhang Zhishan2

Affiliation:

1. Jilin University

2. Quanzhou First Hospital Affiliated to Fujian Medical University

3. Shanghai Jiao Tong University

4. Affiliated Hospital of Nanjing University of Chinese Medicine

Abstract

Abstract Colorectal cancer (CRC) is one of the most prevalent and deadliest illnesses all around the world. Growing proofs demonstrate that tumor-associated macrophages (TAMs) are of critical importance in CRC pathogenesis, but their mechanisms remain yet unknown. The current research was designed to recognize underlying biomarkers associated with TAMs in CRC. We screened macrophage-related gene modules through WGCNA, selected hub genes utilizing the LASSO algorithm and COX regression, and established a model. External validation was performed by expression analysis using datasets GSE14333, GSE74602, and GSE87211. After validating the bioinformatics results using real-time quantitative reverse transcription PCR, we identified SPP1, C5AR1, MMP3, TIMP1, ADAM8 as potential biomarkers associated with macrophages in CRC.

Publisher

Research Square Platform LLC

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