Clarinet Plots: Alternative to Violin Plots to Display Zero-inflated Distribution of scRNA-seq Data
Author:
Affiliation:
1. Research Center for Pre-disease Science, University of Toyama
Publisher
Information Processing Society of Japan
Link
https://www.jstage.jst.go.jp/article/ipsjtbio/17/0/17_48/_pdf
Reference15 articles.
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3. [3] Pierson, E. and Yau, C.: ZIFA: Dimensionality reduction for zero-inflated single-cell gene expression analysis, Genome Biol., Vol.16, p.241 (online), DOI: 10.1186/s13059-015-0805-z (2015).
4. [4] Kharchenko, P.V., Silberstein, L. and Scadden, D.T.: Bayesian approach to single-cell differential expression analysis, Nat. Methods, Vol.11, No.7, pp.740-742 (online), DOI: 10.1038/nmeth.2967 (2014).
5. [5] Qiu, P.: Embracing the dropouts in single-cell RNA-seq analysis, Nat. Commun., Vol.11, No.1, p.1169 (online), DOI: 10.1038/s41467-020-14976-9 (2020).
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