Many direct-to-consumer canine genetic tests can identify the breed of purebred dogs

Author:

Rando Halie M.12,Graim Kiley3,Hampikian Greg4,Greene Casey S.1

Affiliation:

1. Department of Biomedical Informatics, Anschutz School of Medicine, University of Colorado, Aurora, CO

2. Department of Computer Science, Smith College, Northampton, MA

3. Department of Computer and Information Science and Engineering, Herbert Wertheim College of Engineering, University of Florida, Gainesville, FL

4. Department of Biological Sciences, College of Arts and Sciences, Boise State University, Boise, ID

Abstract

Abstract OBJECTIVE To compare pedigree documentation and genetic test results to evaluate whether user-provided photographs influence the breed ancestry predictions of direct-to-consumer (DTC) genetic tests for dogs. ANIMALS 12 registered purebred pet dogs representing 12 different breeds. METHODS Each dog owner submitted 6 buccal swabs, 1 to each of 6 DTC genetic testing companies. Experimenters registered each sample per manufacturer instructions. For half of the dogs, the registration included a photograph of the DNA donor. For the other half of the dogs, photographs were swapped between dogs. DNA analysis and breed ancestry prediction were conducted by each company. The effect of condition (ie, matching vs shuffled photograph) was evaluated for each company’s breed predictions. As a positive control, a convolutional neural network was also used to predict breed based solely on the photograph. RESULTS Results from 5 of the 6 tests always included the dog’s registered breed. One test and the convolutional neural network were unlikely to identify the registered breed and frequently returned results that were more similar to the photograph than the DNA. Additionally, differences in the predictions made across all tests underscored the challenge of identifying breed ancestry, even in purebred dogs. CLINICAL RELEVANCE Veterinarians are likely to encounter patients who have conducted DTC genetic testing and may be asked to explain the results of genetic tests they did not order. This systematic comparison of commercially available tests provides context for interpreting results from consumer-grade DTC genetic testing kits.

Publisher

American Veterinary Medical Association (AVMA)

Reference46 articles.

1. Companion animal medicine in the age of medical genetics;Patterson DF,2000

2. Implementation and utilization of genetic testing in personalized medicine;Abul-Husn NS,2014

3. The use of molecular genetics in the improvement of agricultural populations;Dekkers JCM,2002

4. Researcher responsibilities and genetic counseling for pure-bred dog populations;Bell JS,2011

5. Global Market Insights Inc. Animal genetics market revenue to cross USD 6.4 Bn by 2027: Global Market Insights, Inc

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3