‘It's hollow’: the function of pores within myoglobin

Author:

Tomita Ayana12,Kreutzer Ulrike3,Adachi Shin-ichi24,Koshihara Shin-ya12,Jue Thomas3

Affiliation:

1. Department of Chemistry and Materials Science, Tokyo Institute of Technology, 2-12-1 Oh-okayama, Meguro-ku, Tokyo, 152-8551, Japan

2. Non-equilibrium Dynamics Project, ERATO/JST, 1-1 O-ho, Tsukuba, Ibaraki 305-0801, Japan

3. Department of Biochemistry and Molecular Medicine, University of California Davis, CA 95616-8635, USA

4. Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization, 1-1 O-ho, Tsukuba, Ibaraki 305-0801, Japan

Abstract

SUMMARY Despite a century of research, the cellular function of myoglobin (Mb), the mechanism regulating oxygen (O2) transport in the cell and the structure–function relationship of Mb remain incompletely understood. In particular, the presence and function of pores within Mb have attracted much recent attention. These pores can bind to Xe as well as to other ligands. Indeed, recent cryogenic X-ray crystallographic studies using novel techniques have captured snapshots of carbon monoxide (CO) migrating through these pores. The observed movement of the CO molecule from the heme iron site to the internal cavities and the associated structural changes of the amino acid residues around the cavities confirm the integral role of the pores in forming a ligand migration pathway from the protein surface to the heme. These observations resolve a long-standing controversy – but how these pores affect the physiological function of Mb poses a striking question at the frontier of biology.

Publisher

The Company of Biologists

Subject

Insect Science,Molecular Biology,Animal Science and Zoology,Aquatic Science,Physiology,Ecology, Evolution, Behavior and Systematics

Reference92 articles.

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