ARPC5 deficiency leads to severe early-onset systemic inflammation and mortality

Author:

Sindram Elena1234ORCID,Caballero-Oteyza Andrés56ORCID,Kogata Naoko7ORCID,Chor Mei Huang Shaina7ORCID,Alizadeh Zahra89ORCID,Gámez-Díaz Laura12,Fazlollhi Mohammad Reza89ORCID,Peng Xiao1210,Grimbacher Bodo12611121314ORCID,Way Michael715ORCID,Proietti Michele1256ORCID

Affiliation:

1. Institute for Immunodeficiency, Center for Chronic Immunodeficiency, Medical Center 1 , Faculty of Medicine , , Breisacher Straße 115, 79106 Freiburg , Germany

2. University of Freiburg 1 , Faculty of Medicine , , Breisacher Straße 115, 79106 Freiburg , Germany

3. Spemann Graduate School of Biology and Medicine (SGBM), University of Freiburg 2 , Albertstr. 19A, 79104 Freiburg , Germany

4. University of Freiburg 3 Faculty of Biology , , 79104 Freiburg , Germany

5. Hannover Medical School 4 Department of Rheumatology and Clinical Immunology , , Carl-Neuberg-Str. 1, 30625 Hannover , Germany

6. RESIST – Cluster of Excellence 2155, Hannover Medical School 5 , Carl-Neuberg-Str. 1, 30625 Hannover , Germany

7. The Francis Crick Institute 6 Cellular Signalling and Cytoskeletal Function Laboratory , , London NW1 1AT , UK

8. Immunology, Asthma and Allergy Research Institute, Tehran University of Medical Sciences 7 , Tehran 1419733154 , Iran

9. Paediatrics Center of Excellence, Children's Medical Center, Tehran University of Medical Sciences 8 , Tehran 1419733151 , Iran

10. Johns Hopkins University School of Medicine 9 Department of Genetic Medicine , , Baltimore, MD 21218 , USA

11. Clinic of Rheumatology and Clinical Immunology, Center for Chronic Immunodeficiency (CCI), Medical Center 10 , Faculty of Medicine , , Hugstetterstraße 55, 79106 Freiburg , Germany

12. University of Freiburg 10 , Faculty of Medicine , , Hugstetterstraße 55, 79106 Freiburg , Germany

13. DZIF – German Center for Infection Research, Satellite Center Freiburg 11 , 79104 Freiburg , Germany

14. CIBSS – Centre for Integrative Biological Signalling Studies, University of Freiburg 12 , Schänzlestr. 18, 79104 Freiburg , Germany

15. Imperial College 13 Department of Infectious Disease , , London W2 1PG , UK

Abstract

ABSTRACT The Arp2/3 complex drives the formation of branched actin networks that are essential for many cellular processes. In humans, the ARPC5 subunit of the Arp2/3 complex is encoded by two paralogous genes (ARPC5 and ARPC5L) with 67% identity. Through whole-exome sequencing, we identified a biallelic ARPC5 frameshift variant in a female child who presented with recurrent infections, multiple congenital anomalies, diarrhea and thrombocytopenia, and suffered early demise from sepsis. Her consanguineous parents also had a previous child who died with similar clinical features. Using CRISPR/Cas9-mediated approaches, we demonstrate that loss of ARPC5 affects actin cytoskeleton organization and function in vitro. Homozygous Arpc5−/− mice do not survive past embryonic day 9 owing to developmental defects, including loss of the second pharyngeal arch, which contributes to craniofacial and heart development. Our results indicate that ARPC5 is important for both prenatal development and postnatal immune signaling, in a non-redundant manner with ARPC5L. Moreover, our observations add ARPC5 to the list of genes that should be considered when patients present with syndromic early-onset immunodeficiency, particularly if recessive inheritance is suspected.

Funder

Deutsche Forschungsgemeinschaft

Fritz Thyssen Stiftung

Bundesministerium für Bildung und Forschung

Cancer Research UK

Medical Research Council

Wellcome Trust

European Research Council

Horizon 2020

Albert-Ludwigs-University of Freiburg

Publisher

The Company of Biologists

Subject

General Biochemistry, Genetics and Molecular Biology,Immunology and Microbiology (miscellaneous),Medicine (miscellaneous),Neuroscience (miscellaneous)

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