Quantifying Drosophila adults with the use of a smartphone

Author:

Karpova E. K.1,Komyshev E. G.1,Genaev M. A.12,Adonyeva N. V.1,Afonnikov D. A.1,Eremina M. A.1,Gruntenko N. E.1ORCID

Affiliation:

1. Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia

2. Novosibirsk State University, Novosibirsk, Russia

Abstract

A method for automation of imago quantifying and fecundity assessment in Drosophila with the use of mobile devices running Android operating system is proposed. The traditional manual method of counting the progeny takes a long time and limits the opportunity of making large-scale experiments. Thus, the development of computerized methods that would allow us to automatically make a quantitative estimate of D. melanogaster fecundity is an urgent requirement. We offer a modification of the mobile application SeedCounter that analyzes images of objects placed on a standard sheet of paper for an automatic calculation of D. melanogaster offspring or quantification of adult flies in any other kind of experiment. The relative average error in estimates of the number of flies by mobile app is about 2% in comparison with the manual counting and the processing time is 6 times shorter. Study of the effects of imaging conditions on accuracy of flies counting showed that lighting conditions do not significantly affect this parameter, and higher accuracy can be achieved using high-resolution smartphone cameras (8 Mpx and more). These results indicate the high accuracy and efficiency of the method suggested.

Funder

State Budgeted Project

Russian Foundation for Basic Research

Publisher

The Company of Biologists

Subject

General Agricultural and Biological Sciences,General Biochemistry, Genetics and Molecular Biology

Reference10 articles.

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3. Evaluation of the SeedCounter, a mobile application for grain phenotyping;Komyshev;Front. Plant Sci.,2017

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