An Optimized Three-Dimensional Clustering for Microarray Data

Author:

N. Narmadha1ORCID,Rathipriya R.1ORCID

Affiliation:

1. Periyar University, India

Abstract

This chapter focuses on discrete firefly optimization algorithm (FA)-based microarray data, which is a meta-heuristic, bio-inspired, optimization algorithm based on the flashing behaviour of fireflies, or lighting bugs. Its primary advantage is the global communication among the fireflies, and as a result, it seems more effective for triclustering problem. This chapter aims to render a clear description of a new firefly algorithm (FA) for optimization of tricluster applications. This research work proposes discrete firefly optimization-based triclustering model first time to find the highly correlated tricluster from microarray data. This model is reliable and robust triclustering model because of efficient global communication among the swarming particles called fireflies.

Publisher

IGI Global

Reference15 articles.

1. Deepthi, P. S. S. M. (2015). PSO Based Feature Selection for Clustering Gene Expression Data. IEEE.

2. Fei Han, C.-Q. W.-S.-H.-Q.-S. (2015). A Gene Selection Method for Microarray Data Based on Binary PSO Encoding Gene-to-class Sensitivity Information. IEEE Transactions On Computational Biology And Bioinformatics.

3. Biclustering of gene expression data using Particle Swarm Optimization integrated with pattern-driven local search

4. Li-Yeh Chuang, H.-W. C.-J.-H. (2007). Improved binary PSO for feature selection using gene expression data. Computational Biology and Chemistry Elsevier Ltd.

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