Affiliation:
1. Badji Mokhtar-Annaba University, Algeria
Abstract
The G protein-coupled receptors (GPCRs) include one of the largest and most important families of multifunctional proteins known to molecular biology. They play a key role in cell signaling networks that regulate many physiological processes, such as vision, smell, taste, neurotransmission, secretion, immune responses, metabolism, and cell growth. These proteins are thus very important for understanding human physiology and they are involved in several diseases. Therefore, many efforts in pharmaceutical research are to understand their structures and functions, which is not an easy task, because although thousands GPCR sequences are known, many of them remain orphans. To remedy this, many methods have been developed using methods such as statistics, machine learning algorithms, and bio-inspired approaches. In this article, the authors review the approaches used to develop algorithms for classification GPCRs by trying to highlight the strengths and weaknesses of these different approaches and providing a comparison of their performances.
Reference46 articles.
1. Alem, K. (2011). Contribution à la prédiction de la structure secondaire et tertiaire des protéines: Cas des récepteurs couplés aux protéines G (Rhodopsin-like) du génome humain. Doctoral dissertation, Annaba University, Algeria.
2. In silico investigation of intronless rhodopsin-like G-protein coupled receptors (GPCR) in the human genome: Features and classfication.;K.Alem;Archives de l'Institut Pasteur de Tunis,2007
3. Bakir, B., & Sezerman, O. U. (2006). Functional classification of g-protein coupled receptors, based on their specific ligand coupling patterns. In M. Giacobini, A. Brabazon, S. Cagnoni, A. Ekart, A. I. Esparcia-Alcázar, M. Farooq, … S. Yang (Eds.), Applications of Evolutionary Computing (LNCS, 3907, pp. 1-12).
4. Beigi, M., & Zell, A. (2006). A novel method for classifying subfamilies and sub-subfamilies of g-protein coupled receptors. In N. Maglaveras, I. Chouvarda, V. Koutkias, & R. Brause (Eds.), Proceedings of the 7th International Conference on Biological and Medical Data Analysis (LNB, 4345, pp. 25–36).
5. GPCRpred: an SVM-based method for prediction of families and subfamilies of G-protein coupled receptors
Cited by
2 articles.
订阅此论文施引文献
订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献