An optimal genomic DNA extraction method for shoots of four Dendrocalamus species based on membership function analysis

Author:

Ma Yingchun1ORCID,Li Bowen1,Yang Dejia1,Wang Shuguang123,Yu Lixia12,Zhan Hui12,Li Juan12

Affiliation:

1. College of Life Sciences, Southwest Forestry University, Kunming, 650224, China

2. Yunnan Sympodial Bamboo Key Laboratory, Southwest Forestry University, Kunming, 650224, China

3. Institute of Bamboo & Rattan Science, Southwest Forestry University, Kunming, 650224, China

Abstract

High-quality genomic DNA extraction is fundamental for the study of gene cloning and expression in plants. Therefore, this study evaluated several methods for extracting genomic DNA from shoots of four Dendrocalamus species to determine the optimal technique. Genomic DNA was extracted using three different methods: a commercial DNA extraction kit method, a modified cetyltrimethylammonium bromide method and a sodium dodecyl sulfate method. A membership function analysis was employed to compare these methods. The results demonstrated that the commercial DNA extraction kit method was the most effective and comprehensive approach for extracting genomic DNA from shoots of four Dendrocalamus species. Furthermore, this study provided valuable insights into optimizing techniques for extracting genomic DNA in other bamboo species.

Funder

National Key Research and Development Program of China

Natural Science Foundation of Yunnan Province

Xingdian Talent Support Plan Project

Publisher

Future Science Ltd

Subject

General Biochemistry, Genetics and Molecular Biology,Biotechnology

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