Improving generalization performance of electrocardiogram classification models

Author:

Han HyeongrokORCID,Park SeongjaeORCID,Min Seonwoo,Kim Eunji,Kim HyunGi,Park Sangha,Kim Jin-Kook,Park Junsang,An Junho,Lee Kwanglo,Jeong Wonsun,Chon SangilORCID,Ha Kwon-WooORCID,Han Myungkyu,Choi Hyun-SooORCID,Yoon SungrohORCID

Abstract

Abstract Objective. Recently, many electrocardiogram (ECG) classification algorithms using deep learning have been proposed. Because the ECG characteristics vary across datasets owing to variations in factors such as recorded hospitals and the race of participants, the model needs to have a consistently high generalization performance across datasets. In this study, as part of the PhysioNet/Computing in Cardiology Challenge (PhysioNet Challenge) 2021, we present a model to classify cardiac abnormalities from the 12- and the reduced-lead ECGs. Approach. To improve the generalization performance of our earlier proposed model, we adopted a practical suite of techniques, i.e. constant-weighted cross-entropy loss, additional features, mixup augmentation, squeeze/excitation block, and OneCycle learning rate scheduler. We evaluated its generalization performance using the leave-one-dataset-out cross-validation setting. Furthermore, we demonstrate that the knowledge distillation from the 12-lead and large-teacher models improved the performance of the reduced-lead and small-student models. Main results. With the proposed model, our DSAIL SNU team has received Challenge scores of 0.55, 0.58, 0.58, 0.57, and 0.57 (ranked 2nd, 1st, 1st, 2nd, and 2nd of 39 teams) for the 12-, 6-, 4-, 3-, and 2-lead versions of the hidden test set, respectively. Significance. The proposed model achieved a higher generalization performance over six different hidden test datasets than the one we submitted to the PhysioNet Challenge 2020.

Funder

BK21 FOUR program of the Education and Research Program for Future ICT Pioneers, Seoul National University

Institute of Information & communications Technology Planning & Evaluation (IITP) grant funded by the Korea government

National Research Foundation of Korea(NRF) grant funded by the Korea government

Korea Medical Device Development Fund grant funded by the Korea government

National Research Foundation of Korea (NRF) grant funded by the Korea government

Regional Innovation Strategy (RIS) through the National Research Foundation of Korea(NRF) funded by the Ministry of Education

Publisher

IOP Publishing

Subject

Physiology (medical),Biomedical Engineering,Physiology,Biophysics

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