Towards robust data-driven automated recovery of symbolic conservation laws from limited data

Author:

Oellerich TraceyORCID,Emelianenko MariaORCID

Abstract

Abstract Conservation laws are an inherent feature in many systems modeling real world phenomena, in particular, those modeling biological and chemical systems. If the form of the underlying dynamical system is known, linear algebra and algebraic geometry methods can be used to identify the conservation laws. Our work focuses on using data-driven methods to identify the conservation law(s) in the absence of the knowledge of system dynamics. We develop a robust data-driven computational framework that automates the process of identifying the number and type of the conservation law(s) while keeping the amount of required data to a minimum. We demonstrate that due to relative stability of singular vectors to noise we are able to reconstruct correct conservation laws without the need for excessive parameter tuning. While we focus primarily on biological examples, the framework proposed herein is suitable for a variety of data science applications and can be coupled with other machine learning approaches.

Funder

Office of the Provost and Executive Vice President, George Mason University

Simons Foundation Grant

Publisher

IOP Publishing

Reference56 articles.

1. Biological networks with singular Jacobians: their origins and adaptation criteria;Oellerich,2021

2. Biochemical reaction networks: an invitation for algebraic geometers;Dickenstein,2016

3. Inverse problem on conservation laws;Popovych;Physica D,2020

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