Bonded straight and helical flagellar filaments form ultra-low-density glasses

Author:

Yardimci Sevim12ORCID,Gibaud Thomas13ORCID,Schwenger Walter1,Sartucci Matthew R.4,Olmsted Peter D.4ORCID,Urbach Jeffrey S.4,Dogic Zvonimir156ORCID

Affiliation:

1. The Martin Fisher School of Physics, Brandeis University, Waltham, MA 02454

2. Single Molecule Imaging of Genome Duplication and Maintenance Laboratory, The Francis Crick Institute, NW1 1AT London, UK

3. Univ Lyon, Ens de Lyon, Univ Claude Bernard, CNRS, Laboratoire de Physique, F-69342 Lyon, France

4. Department of Physics Institute for Soft Matter Synthesis and Metrology, Georgetown University, Washington, DC 20057

5. Department of Physics, University of California at Santa Barbara, Santa Barbara, CA 93106

6. Biomolecular Science and Engineering, University of California at Santa Barbara, Santa Barbara, CA 93106

Abstract

We study how the three-dimensional shape of rigid filaments determines the microscopic dynamics and macroscopic rheology of entangled semidilute Brownian suspensions. To control the filament shape we use bacterial flagella, which are microns-long helical or straight filaments assembled from flagellin monomers. We compare the dynamics of straight rods, helical filaments, and shape-diblock copolymers composed of seamlessly joined straight and helical segments. Caged by their neighbors, straight rods preferentially diffuse along their long axis, but exhibit significantly suppressed rotational diffusion. Entangled helical filaments escape their confining tube by corkscrewing through the dense obstacles created by other filaments. By comparison, the adjoining segments of the rod-helix shape-diblocks suppress both the translation and the corkscrewing dynamics. Consequently, the shape-diblock filaments become permanently jammed at exceedingly low densities. We also measure the rheological properties of semidilute suspensions and relate their mechanical properties to the microscopic dynamics of constituent filaments. In particular, rheology shows that an entangled suspension of shape rod-helix copolymers forms a low-density glass whose elastic modulus can be estimated by accounting for how shear deformations reduce the entropic degrees of freedom of constrained filaments. Our results demonstrate that the three-dimensional shape of rigid filaments can be used to design rheological properties of semidilute fibrous suspensions.

Funder

National Science Foundation

National Institute for Standards and Technology

Publisher

Proceedings of the National Academy of Sciences

Subject

Multidisciplinary

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