Targeting oncogenic KRAS with molecular brush-conjugated antisense oligonucleotides

Author:

Wang Dali1ORCID,Wang Qiwei23ORCID,Wang Yuyan1,Chen Peiru1,Lu Xueguang4ORCID,Jia Fei1,Sun Yehui1,Sun Tingyu1,Zhang Lei1ORCID,Che Fangyuan1,He Jialu1,Lian Liming1,Morano Gemma1ORCID,Shen Michael1,Ren Mengqi1,Dong Sijia S.1ORCID,Zhao Jean J.23ORCID,Zhang Ke156ORCID

Affiliation:

1. Department of Chemistry and Chemical Biology, Northeastern University, Boston, MA 02115

2. Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02115

3. Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115

4. David H. Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02139

5. Department of Chemical Engineering, Northeastern University, Boston, MA 02115

6. Department of Bioengineering, Northeastern University, Boston, MA 02115

Abstract

The mutant form of the guanosine triphosphatase (GTPase) KRAS is a key driver in human tumors but remains a challenging therapeutic target, making KRAS MUT cancers a highly unmet clinical need. Here, we report a class of bottlebrush polyethylene glycol (PEG)–conjugated antisense oligonucleotides (ASOs) for potent in vivo KRAS depletion. Owing to their highly branched architecture, these molecular nanoconstructs suppress nearly all side effects associated with DNA–protein interactions and substantially enhance the pharmacological properties of the ASO, such as plasma pharmacokinetics and tumor uptake. Systemic delivery to mice bearing human non–small-cell lung carcinoma xenografts results in a significant reduction in both KRAS levels and tumor growth, and the antitumor performance well exceeds that of current popular ASO paradigms, such as chemically modified oligonucleotides and PEGylation using linear or slightly branched PEG. Importantly, these conjugates relax the requirement on the ASO chemistry, allowing unmodified, natural phosphodiester ASOs to achieve efficacy comparable to that of chemically modified ones. Both the bottlebrush polymer and its ASO conjugates appear to be safe and well tolerated in mice. Together, these data indicate that the molecular brush–ASO conjugate is a promising therapeutic platform for the treatment of KRAS -driven human cancers and warrant further preclinical and clinical development.

Funder

HHS | NIH | National Cancer Institute

HHS | NIH | National Institute of General Medical Sciences

National Science Foundation

Publisher

Proceedings of the National Academy of Sciences

Subject

Multidisciplinary

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