A generalist–specialist trade-off between switchgrass cytotypes impacts climate adaptation and geographic range

Author:

Napier Joseph D.1ORCID,Grabowski Paul P.2ORCID,Lovell John T.2,Bonnette Jason1,Mamidi Sujan2ORCID,Gomez-Hughes Maria Jose1ORCID,VanWallendael Acer3,Weng Xiaoyu1,Handley Lori H.2,Kim Min K.2,Boe Arvid R.4,Fay Philip A.5ORCID,Fritschi Felix B.6ORCID,Jastrow Julie D.7ORCID,Lloyd-Reilley John8,Lowry David B.3ORCID,Matamala Roser7ORCID,Mitchell Robert B.9,Rouquette Francis M.10ORCID,Wu Yanqi11ORCID,Webber Jenell2,Jones Teresa2,Barry Kerrie12,Grimwood Jane2ORCID,Schmutz Jeremy212ORCID,Juenger Thomas E.1ORCID

Affiliation:

1. Department of Integrative Biology, University of Texas at Austin, Austin, TX 78712

2. Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806

3. Department of Plant Biology, Michigan State University, East Lansing, MI 48824

4. Department of Agronomy, Horticulture, and Plant Science, South Dakota State University, Brookings, SD 57007

5. Grassland, Soil, and Water Research Laboratory, US Department of Agriculture–Agricultural Research Service, Temple, TX 76502

6. Division of Plant Science and Technology, University of Missouri, Columbia, MO 65211

7. Environmental Science Division, Argonne National Laboratory, Lemont, IL 60439

8. Kika de la Garza Plant Materials Center, US Department of Agriculture–Natural Resources Conservation Service, Kingsville, TX 78363

9. Wheat, Sorghum, and Forage Research Unit, US Department of Agriculture–Agricultural Research Service, Lincoln, NE 68583

10. Texas A&M AgriLife Research and Extension Center, Texas A&M University, Overton, TX 75684

11. Department of Plant and Soil Sciences, Oklahoma State University, Stillwater, OK 74078

12. Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720

Abstract

Significance Polyploidy, which occurs in roughly half of all flowering plants and an even higher percentage of grasses, is thought to be a major driver of adaptation. Higher numbers of copies of each gene in polyploid genomes can increase genetic diversity, which could drive shifts in habitat preference, adaptability, and fitness. To test the effects of increased ploidy, we compared genomic diversity, environmental niche, and fitness responses across climatic gradients between tetraploid and octoploid switchgrass. We found that the octoploids contained novel combinations of the ancestral tetraploid genetic diversity, which was linked to the expansion of switchgrass into unsuitable habitats for tetraploid populations. Our experiments revealed evidence of niche divergence, differential fitness, and a generalist–specialist trade-off between cytotypes.

Publisher

Proceedings of the National Academy of Sciences

Subject

Multidisciplinary

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