Diagnosis and prognosis of breast cancer by high-performance serum metabolic fingerprints

Author:

Huang Yida12ORCID,Du Shaoqian3ORCID,Liu Jun4,Huang Weiyi3,Liu Wanshan12,Zhang Mengji12,Li Ning3,Wang Ruimin12,Wu Jiao12,Chen Wei12,Jiang Mengyi3,Zhou Tianhao3,Cao Jing12,Yang Jing12,Huang Lin12,Gu An12,Niu Jingyang1ORCID,Cao Yuan3,Zong Wei-Xing5,Wang Xin6ORCID,Liu Jun3,Qian Kun12,Wang Hongxia3

Affiliation:

1. State Key Laboratory for Oncogenes and Related Genes, School of Biomedical Engineering and Institute of Medical Robotics, Shanghai Jiao Tong University, Shanghai 200030, China

2. Division of Cardiology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai 200127, China

3. State Key Laboratory of Oncogenes and Related Genes, Department of Oncology, Shanghai General Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai 200080, China

4. Department of Breast-Thyroid Surgery, Shanghai General Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai 200080, China

5. Department of Chemical Biology, Ernest Mario School of Pharmacy, Rutgers University, Piscataway, NJ 08854

6. Department of Surgery, The Chinese University of Hong Kong, Prince of Wales Hospital, Shatin, Hong Kong SAR, China

Abstract

Significance Breast cancer (BrCa) is the most common cancer worldwide, and high-performance metabolic analysis is emerging in diagnosis and prognosis of BrCa. Here, we used nanoparticle-enhanced laser desorption/ionization mass spectrometry to record serum metabolic fingerprints of BrCa in seconds, achieving high reproducibility and low consumption of direct serum detection. Our analytical method, combined with the aid of machine learning algorithms, was demonstrated to provide high diagnostic efficiency with accuracy of 88.8% and desirable prognostic prediction ( P < 0.005). Furthermore, seven metabolic biomarkers differentially enriched in BrCa serum and their related pathways were identified. Together, our findings provide a tool to characterize BrCa and highlight certain metabolic signatures as potential diagnostic and prognostic factors of diseases including but not limited to BrCa.

Funder

National Natural Science Foundation of China

Ministry of Science and Technology of the People''''s Republic of China

Shanghai Institutions of Higher Learning

Shanghai Science and Technology Innovation Active Plan

Clinical Research Plan of SHDC

Shanghai Rising-Star Program

Innovation Research Plan by the Shanghai Municipal Education Commission

Clinical Research Innovation Plan of Shanghai General Hospital

Natural Science Fundation of Jiangsu Province

Shanghai Science and Technology Commission

Publisher

Proceedings of the National Academy of Sciences

Subject

Multidisciplinary

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