The evolution of synaptic and cognitive capacity: Insights from the nervous system transcriptome of Aplysia

Author:

Orvis Joshua1,Albertin Caroline B.2,Shrestha Pragya3,Chen Shuangshuang3,Zheng Melanie3,Rodriguez Cheyenne J.2,Tallon Luke J.1,Mahurkar Anup1,Zimin Aleksey V.4,Kim Michelle5,Liu Kelvin5,Kandel Eric R.678ORCID,Fraser Claire M.1,Sossin Wayne9ORCID,Abrams Thomas W.310

Affiliation:

1. Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201

2. Eugene Bell Center for Regenerative Biology and Tissue Engineering, Marine Biological Laboratory, Woods Hole, MA 02543

3. Department of Pharmacology, University of Maryland School of Medicine, Baltimore, MD 21201

4. Department of Biomedical Engineering, Center for Computational Biology, Johns Hopkins University, Baltimore, MD 21205

5. Circulomics Inc., Baltimore, MD 21202

6. Department of Neuroscience, Columbia University, New York, NY 10032

7. New York State Psychiatric Institute, New York, NY 10032

8. HHMI, New York, NY 10032

9. Department of Neurology and Neurosurgery, Montreal Neurological Institute, McGill University, Montreal, QC H3A 2B4, Canada

10. Program in Neuroscience, University of Maryland School of Medicine, Baltimore, MD 21201

Abstract

The gastropod mollusk Aplysia is an important model for cellular and molecular neurobiological studies, particularly for investigations of molecular mechanisms of learning and memory. We developed an optimized assembly pipeline to generate an improved Aplysia nervous system transcriptome. This improved transcriptome enabled us to explore the evolution of cognitive capacity at the molecular level. Were there evolutionary expansions of neuronal genes between this relatively simple gastropod Aplysia (20,000 neurons) and Octopus (500 million neurons), the invertebrate with the most elaborate neuronal circuitry and greatest behavioral complexity? Are the tremendous advances in cognitive power in vertebrates explained by expansion of the synaptic proteome that resulted from multiple rounds of whole genome duplication in this clade? Overall, the complement of genes linked to neuronal function is similar between Octopus and Aplysia. As expected, a number of synaptic scaffold proteins have more isoforms in humans than in Aplysia or Octopus . However, several scaffold families present in mollusks and other protostomes are absent in vertebrates, including the Fifes, Lev10s, SOLs, and a NETO family. Thus, whereas vertebrates have more scaffold isoforms from select families, invertebrates have additional scaffold protein families not found in vertebrates. This analysis provides insights into the evolution of the synaptic proteome. Both synaptic proteins and synaptic plasticity evolved gradually, yet the last deuterostome-protostome common ancestor already possessed an elaborate suite of genes associated with synaptic function, and critical for synaptic plasticity.

Funder

Howard Hughes Medical Institute

National Science Foundation

HHS | National Institutes of Health

Publisher

Proceedings of the National Academy of Sciences

Subject

Multidisciplinary

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