POTRA domains of the TamA insertase interact with the outer membrane and modulate membrane properties

Author:

Mellouk Abdelkader12,Jaouen Paul23,Ruel Louis-Jacques245ORCID,Lê Michel12,Martini Cyrielle12,Moraes Trevor F.6ORCID,El Bakkouri Majida7,Lagüe Patrick245,Boisselier Elodie23ORCID,Calmettes Charles12ORCID

Affiliation:

1. Institut National de la Rechyuerche Scientifique (INRS), Centre Armand-Frappier Santé Biotechnologie, Laval, QC H7V 1B7, Canada

2. Regroupement Québécois de recherche sur la fonction, la structure et l’ingénierie des protéines (PROTEO), Université du Québec à Montréal, Montréal, QC H2X 3Y7, Canada

3. Faculty of Medicine, Department of Ophthalmology and Otolaryngology—Head and Neck Surgery, centre hospitalier universitaire de Québec, Université Laval, Québec City, QC G1S 4L8, Canada

4. Département de Biochimie, de Microbiologie et de Bio-informatique, Université Laval, Québec City, QC G1V 0A6, Canada

5. Institut de Biologie Intégrative et des Systèmes, Université Laval, Québec City, QC G1V 0A6, Canada

6. Department of Biochemistry, University of Toronto, Toronto, ON M5G 1M1, Canada

7. National Research Council Canada, Human Health Therapeutics, Montréal, QC H4P 2R2, Canada

Abstract

The outer membrane (OM) of gram-negative bacteria serves as a vital organelle that is densely populated with OM proteins (OMPs) and plays pivotal roles in cellular functions and virulence. The assembly and insertion of these OMPs into the OM represent a fundamental process requiring specialized molecular chaperones. One example is the translocation and assembly module (TAM), which functions as a transenvelope chaperone promoting the folding of specific autotransporters, adhesins, and secretion systems. The catalytic unit of TAM, TamA, comprises a catalytic β-barrel domain anchored within the OM and three periplasmic polypeptide-transport-associated (POTRA) domains that recruit the TamB subunit. The latter acts as a periplasmic ladder that facilitates the transport of unfolded OMPs across the periplasm. In addition to their role in recruiting the auxiliary protein TamB, our data demonstrate that the POTRA domains mediate interactions with the inner surface of the OM, ultimately modulating the membrane properties. Through the integration of X-ray crystallography, molecular dynamic simulations, and biomolecular interaction methodologies, we located the membrane-binding site on the first and second POTRA domains. Our data highlight a binding preference for phosphatidylglycerol, a minor lipid constituent present in the OM, which has been previously reported to facilitate OMP assembly. In the context of the densely OMP-populated membrane, this association may serve as a mechanism to secure lipid accessibility for nascent OMPs through steric interactions with existing OMPs, in addition to creating favorable conditions for OMP biogenesis.

Funder

Canadian Government | Natural Sciences and Engineering Research Council of Canada

FRQ | Fonds de recherche du Québec – Nature et technologies

Publisher

Proceedings of the National Academy of Sciences

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