Unraveling clonal CD8 T cell expansion and identification of essential factors in γ-herpesvirus-induced lymphomagenesis

Author:

Gong Meijiao1ORCID,Myster Françoise1ORCID,Azouz Abdulkader23,Sanchez Sanchez Guillem2345,Li Shifang1,Charloteaux Benoit6ORCID,Yang Bin1ORCID,Nichols Jenna7ORCID,Lefevre Lucas8,Javaux Justine1,Leemans Sylvain1,Nivelles Olivier1,van Campe Willem9,Roels Stefan9ORCID,Mostin Laurent9ORCID,van den Berg Thierry9,Davison Andrew J.7ORCID,Gillet Laurent1ORCID,Connelley Timothy8,Vermijlen David2345ORCID,Goriely Stanislas23,Vanderplasschen Alain15,Dewals Benjamin G.15ORCID

Affiliation:

1. Department of Infectious and Parasitic Diseases, Faculty of Veterinary Medicine—Fundamental and Applied Research for Animals & Health (FARAH), University of Liège, Liège 4000, Belgium

2. Institute for Medical Immunology, Université Libre de Bruxelles, Gosselies 6041, Belgium

3. Center for Research in Immunology, Université Libre de Bruxelles, Gosselies 6041, Belgium

4. Department of Pharmacotherapy and Pharmaceutics, Université Libre de Bruxelles, Brussels 1050, Belgium

5. Walloon Excellence in Life Sciences and Biotechnology (WELBIO), WEL Research Institute, Wavre 1300, Belgium

6. Groupe Interdisciplinaire de Génoprotéomique Appliquée (GIGA), GIGA-Genomics core facility, University of Liège, Liège 4000, Belgium

7. Medical Research Council (MRC)-University of Glasgow Centre for Virus Research, Glasgow G61 1QH, United Kingdom

8. The Roslin Institute, The Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush, Midlothian EH25 9RG, United Kingdom

9. Sciensano, Scientific Directorate Infectious Diseases in Animals, Experimental Center Machelen, Machelen 1830, Belgium

Abstract

Alcelaphine gammaherpesvirus 1 (AlHV-1) asymptomatically persists in its natural host, the wildebeest. However, cross-species transmission to cattle results in the induction of an acute and lethal peripheral T cell lymphoma-like disease (PTCL), named malignant catarrhal fever (MCF). Our previous findings demonstrated an essential role for viral genome maintenance in infected CD8 + T lymphocytes but the exact mechanism(s) leading to lymphoproliferation and MCF remained unknown. To decipher how AlHV-1 dysregulates T lymphocytes, we first examined the global phenotypic changes in circulating CD8 + T cells after experimental infection of calves. T cell receptor repertoire together with transcriptomics and epigenomics analyses demonstrated an oligoclonal expansion of infected CD8 + T cells displaying effector and exhaustion gene signatures, including GZMA, GNLY, PD-1, and TOX2 expression. Then, among viral genes expressed in infected CD8 + T cells, we uncovered A10 that encodes a transmembrane signaling protein displaying multiple tyrosine residues, with predicted ITAM and SH3 motifs. Impaired A10 expression did not affect AlHV-1 replication in vitro but rendered AlHV-1 unable to induce MCF. Furthermore, A10 was phosphorylated in T lymphocytes in vitro and affected T cell signaling. Finally, while AlHV-1 mutants expressing mutated forms of A10 devoid of ITAM or SH3 motifs (or both) were able to induce MCF, a recombinant virus expressing a mutated form of A10 unable to phosphorylate its tyrosine residues resulted in the lack of MCF and protected against a wild-type virus challenge. Thus, we could characterize the nature of this γ-herpesvirus-induced PTCL-like disease and identify an essential mechanism explaining its development.

Funder

Fonds De La Recherche Scientifique - FNRS

Walloon excellence in life sciences and biotechnology

EC | European Regional Development Fund

Publisher

Proceedings of the National Academy of Sciences

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