Insights into stereoselective ring formation in canonical strigolactone: Identification of a dirigent domain-containing enzyme catalyzing orobanchol synthesis

Author:

Homma Masato1,Wakabayashi Takatoshi1ORCID,Moriwaki Yoshitaka23,Shiotani Nanami4ORCID,Shigeta Takumi4,Isobe Kazuki5,Okazawa Atsushi56,Ohta Daisaku56,Terada Tohru23,Shimizu Kentaro23,Mizutani Masaharu1ORCID,Takikawa Hirosato4ORCID,Sugimoto Yukihiro1ORCID

Affiliation:

1. Department of Agrobioscience, Graduate School of Agricultural Science, Kobe University, Kobe 657-8501, Japan

2. Department of Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo 113-8657, Japan

3. Collaborative Research Institute for Innovative Microbiology, The University of Tokyo, Tokyo 113-8657, Japan

4. Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo 113-8657, Japan

5. Department of Applied Life Sciences, Graduate School of Life and Environmental Sciences, Osaka Prefecture University, Sakai 599-8531, Japan

6. Department of Agricultural Biology, Graduate School of Agriculture, Osaka Metropolitan University, Sakai 599-8531, Japan

Abstract

Strigolactones (SLs) are plant apocarotenoids with diverse roles and structures. Canonical SLs, widespread and characterized by structural variations in their tricyclic lactone (ABC-ring), are classified into two types based on C-ring configurations. The steric C-ring configuration emerges during the BC-ring closure, downstream of the biosynthetic intermediate, carlactonoic acid (CLA). Most plants produce either type of canonical SLs stereoselectively, e.g., tomato ( Solanum lycopersicum ) yields orobanchol with an α-oriented C-ring. The mechanisms driving SL structural diversification are partially understood, with limited insight into functional implications. Furthermore, the exact molecular mechanism for the stereoselective BC-ring closure reaction is yet to be known. We identified an enzyme, the stereoselective BC-ring-forming factor (SRF), from the dirigent protein (DIR) family, specifically the DIR-f subfamily, whose biochemical function had not been characterized, making it a key enzyme in stereoselective canonical SL biosynthesis with the α-oriented C-ring. We first confirm the precise catalytic function of the tomato cytochrome P450 SlCYP722C, previously shown to be involved in orobanchol biosynthesis [T. Wakabayashi et al., Sci. Adv. 5 , eaax9067 (2019)], to convert CLA to 18-oxocarlactonoic acid. We then show that SRF catalyzes the stereoselective BC-ring closure reaction of 18-oxocarlactonoic acid, forming orobanchol. Our methodology combines experimental and computational techniques, including SRF structure prediction and conducting molecular dynamics simulations, suggesting a catalytic mechanism based on the conrotatory 4π-electrocyclic reaction for the stereoselective BC-ring formation in orobanchol. This study sheds light on the molecular basis of how plants produce SLs with specific stereochemistry in a controlled manner.

Funder

MEXT | JST | Science and Technology Research Partnership for Sustainable Development

MEXT | JST | ACT-X

MEXT | JST | Precursory Research for Embryonic Science and Technology

MEXT | Japan Society for the Promotion of Science

Japan Agency for Medical Research and Development

Publisher

Proceedings of the National Academy of Sciences

Cited by 1 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

1. A dirigent of the ring for strigolactone stereochemistry;Proceedings of the National Academy of Sciences;2024-08-12

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