Root angle is controlled byEGT1in cereal crops employing an antigravitropic mechanism

Author:

Fusi Riccardo12ORCID,Rosignoli Serena3ORCID,Lou Haoyu145,Sangiorgi Giuseppe3ORCID,Bovina Riccardo3,Pattem Jacob K.67ORCID,Borkar Aditi N.89,Lombardi Marco110ORCID,Forestan Cristian3ORCID,Milner Sara G.3,Davis Jayne L.1ORCID,Lale Aneesh12ORCID,Kirschner Gwendolyn K.11,Swarup Ranjan1ORCID,Tassinari Alberto3,Pandey Bipin K.12,York Larry M.112,Atkinson Brian S.1ORCID,Sturrock Craig J.1ORCID,Mooney Sacha J.1ORCID,Hochholdinger Frank11,Tucker Matthew R.45ORCID,Himmelbach Axel13ORCID,Stein Nils1314ORCID,Mascher Martin1315ORCID,Nagel Kerstin A.16ORCID,De Gara Laura10ORCID,Simmonds James17,Uauy Cristobal17ORCID,Tuberosa Roberto3ORCID,Lynch Jonathan P.118ORCID,Yakubov Gleb E.6,Bennett Malcolm J.12ORCID,Bhosale Rahul12ORCID,Salvi Silvio3ORCID

Affiliation:

1. School of Biosciences, University of Nottingham, LE12 5RD Nottingham, United Kingdom

2. Future Food Beacon of Excellence, University of Nottingham, LE12 5RD Nottingham, United Kingdom

3. Department of Agricultural and Food Sciences, University of Bologna, 40127 Bologna, Italy

4. School of Agriculture, Food and Wine, Waite Research Institute, University of Adelaide, Urrbrae, SA 5064, Australia

5. Australian Research Council Centre of Excellence in Plant Cell Walls, University of Adelaide, Glen Osmond, SA 5062, Australia

6. Food Sciences, University of Nottingham, LE12 5RD Nottingham, United Kingdom

7. National Centre for Molecular Hydrodynamics, and Soft Matter Biomaterials and Bio-interfaces, University of Nottingham, LE12 5RD, United Kingdom

8. School of Veterinary Medicine and Science, University of Nottingham, LE12 5RD Nottingham, United Kingdom

9. Wolfson Center for Global Virus Research, University of Nottingham, LE12 5RD Nottingham, United Kingdom

10. Department of Science and Technology for Humans and the Environment, Università Campus Bio-Medico di Roma, Rome, 00128 Italy

11. Institute of Crop Sciences and Resource Conservation, Crop Functional Genomics, University of Bonn, 53113 Bonn, Germany

12. Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37830

13. Leibniz Institute of Plant Genetics and Crop Plant Research, 06466 Gaterslelben, Germany

14. Center of integrated Breeding Research, Department of Crop Sciences, Georg-August-University, 37075 Göttingen, Germany

15. German Centre for Integrative Biodiversity Research Halle-Jena-Leipzig, 04103 Leipzig, Germany

16. Institute of Bio- and Geo-sciences, Plant Sciences, 52428 Juelich, Germany

17. John Innes Centre, Norwich Research Park, NR4 7UH Norwich, United Kingdom

18. Department of Plant Science, Pennsylvania State University, University Park, PA 16802

Abstract

Root angle in crops represents a key trait for efficient capture of soil resources. Root angle is determined by competing gravitropic versus antigravitropic offset (AGO) mechanisms. Here we report a root angle regulatory gene termedENHANCED GRAVITROPISM1(EGT1) that encodes a putative AGO component, whose loss-of-function enhances root gravitropism. Mutations in barley and wheatEGT1genes confer a striking root phenotype, where every root class adopts a steeper growth angle.EGT1encodes an F-box and Tubby domain-containing protein that is highly conserved across plant species. Haplotype analysis found that natural allelic variation at the barleyEGT1locus impacts root angle. Gravitropic assays indicated thatHvegt1roots bend more rapidly than wild-type. Transcript profiling revealedHvegt1roots deregulate reactive oxygen species (ROS) homeostasis and cell wall-loosening enzymes and cofactors. ROS imaging shows thatHvegt1root basal meristem and elongation zone tissues have reduced levels. Atomic force microscopy measurements detected elongatingHvegt1root cortical cell walls are significantly less stiff than wild-type. In situ analysis identifiedHvEGT1is expressed in elongating cortical and stele tissues, which are distinct from known root gravitropic perception and response tissues in the columella and epidermis, respectively. We propose that EGT1 controls root angle by regulating cell wall stiffness in elongating root cortical tissue, counteracting the gravitropic machinery’s known ability to bend the root via its outermost tissues. We conclude that root angle is controlled byEGT1in cereal crops employing an antigravitropic mechanism.

Funder

UKRI | Biotechnology and Biological Sciences Research Council

DOE | Advanced Research Projects Agency - Energy

Publisher

Proceedings of the National Academy of Sciences

Subject

Multidisciplinary

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