Structural basis of peptidomimetic agonism revealed by small-molecule GLP-1R agonists Boc5 and WB4-24

Author:

Cong Zhaotong1,Zhou Qingtong1ORCID,Li Yang1,Chen Li-Nan23,Zhang Zi-Chen4,Liang Anyi5,Liu Qing6ORCID,Wu Xiaoyan6,Dai Antao6,Xia Tian5,Wu Wei4,Zhang Yan23ORCID,Yang Dehua6789ORCID,Wang Ming-Wei16789ORCID

Affiliation:

1. Department of Pharmacology, School of Basic Medical Sciences, Fudan University, Shanghai 200032, China

2. Department of Biophysics, Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou 310058, China

3. Department of Pathology, Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou 310058, China

4. School of Pharmacy, Fudan University, Shanghai 201203, China

5. School of Artificial Intelligence and Automation, Huazhong University of Science and Technology, Wuhan 430074, China

6. The National Center for Drug Screening, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China

7. School of Graduate Studies, University of Chinese Academy of Sciences, Beijing 100049, China

8. The CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China

9. Department of Bioactivity Screening, Research Center for Deepsea Bioresources, Sanya, 572025, China

Abstract

Significance Glucagon-like peptide-1 receptor (GLP-1R) agonists are efficacious in the treatment of type 2 diabetes and obesity. While most clinically used agents require subcutaneous injection, Boc5, as the first orthosteric nonpeptidic agonist of GLP-1R, suffers from poor oral bioavailability that hinders its therapeutic development. The cryoelectron microscopy structures of Boc5 and its closely related analog WB4-24 presented here reveal a binding pocket located deeper in the transmembrane domain for nonpeptidic GLP-1R agonists. Molecular interaction with this site may facilitate a broad spectrum of in vivo agonistic activities, in addition to that with the upper helical bundles presumably responsible for biased signaling. These findings deepen our understanding of peptidomimetic agonism at GLP-1R and may help design better drug leads against this important target.

Funder

National Natural Science Foundation of China

National Science and Technology Major Project of China

National Science & Technology Major Project of China

National Science and Technology Major Project of China - Innovation 2030 for Brain Science and Brain-Inspired Technology

National Key Basic Research Program of China

Novo Nordisk-CAS Research Fund grant

Publisher

Proceedings of the National Academy of Sciences

Subject

Multidisciplinary

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