RNA m 6 A demethylase ALKBH5 regulates the development of γδ T cells

Author:

Ding Chenbo12ORCID,Xu Hao3,Yu Zhibin12,Roulis Manolis3,Qu Rihao345,Zhou Jing12,Oh Joonseok67,Crawford Jason678,Gao Yimeng91011,Jackson Ruaidhrí3,Sefik Esen3,Li Simiao3,Wei Zheng3ORCID,Skadow Mathias3,Yin Zhinan1213,Ouyang Xinshou14,Wang Lei1,Zou Qiang1,Su Bing12ORCID,Hu Weiguo1,Flavell Richard A.315,Li Hua-Bing12ORCID

Affiliation:

1. Department of Geriatrics, Center for Immune-Related Diseases, Shanghai Institute of Immunology, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China

2. Shanghai Jiao Tong University School of Medicine–Yale University Institute for Immune Metabolism, Shanghai 200025, China

3. Department of Immunobiology, Yale University School of Medicine, New Haven, CT 06520

4. Program of Computational Biology and Bioinformatics, Yale University, New Haven, CT 06520

5. Department of Pathology, Yale University School of Medicine, New Haven, CT 06510

6. Department of Chemistry, Yale University, New Haven, CT 06520

7. Chemical Biology Institute, Yale University, West Haven, CT 06516

8. Department of Microbial Pathogenesis, Yale University School of Medicine, New Haven, CT 06520

9. Section of Hematology, Yale Cancer Center and Department of Internal Medicine, Yale University School of Medicine, New Haven, CT 06520

10. Yale Stem Cell Center, Yale University School of Medicine, New Haven, CT 06520

11. Yale RNA Center, Yale University School of Medicine, New Haven, CT 06520

12. Zhuhai Precision Medical Center, Zhuhai People’s Hospital, Jinan University, Zhuhai 519000, Guangdong, China

13. Biomedical Translational Research Institute, Faculty of Medical Science, Jinan University, Guangzhou 510632, Guangdong, China

14. Section of Digestive Diseases, Department of Internal Medicine, Yale University School of Medicine, New Haven, CT 06520

15. HHMI, Yale University School of Medicine, New Haven, CT 06520

Abstract

γδ T cells are an abundant T cell population at the mucosa and are important in providing immune surveillance as well as maintaining tissue homeostasis. However, despite γδ T cells’ origin in the thymus, detailed mechanisms regulating γδ T cell development remain poorly understood. N 6 -methyladenosine (m 6 A) represents one of the most common posttranscriptional modifications of messenger RNA (mRNA) in mammalian cells, but whether it plays a role in γδ T cell biology is still unclear. Here, we show that depletion of the m 6 A demethylase ALKBH5 in lymphocytes specifically induces an expansion of γδ T cells, which confers enhanced protection against gastrointestinal Salmonella typhimurium infection. Mechanistically, loss of ALKBH5 favors the development of γδ T cell precursors by increasing the abundance of m 6 A RNA modification in thymocytes, which further reduces the expression of several target genes including Notch signaling components Jagged1 and Notch2 . As a result, impairment of Jagged1/Notch2 signaling contributes to enhanced proliferation and differentiation of γδ T cell precursors, leading to an expanded mature γδ T cell repertoire. Taken together, our results indicate a checkpoint role of ALKBH5 and m 6 A modification in the regulation of γδ T cell early development.

Funder

National Natural Science Foundation of China

Science and Technology Commission of Shanghai Municipality

China Postdoctoral Science Foundation

Howard Hughes Medical Institute

Publisher

Proceedings of the National Academy of Sciences

Subject

Multidisciplinary

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