MEDUSA: A cloud-based tool for the analysis of X-ray diffuse scattering to obtain the bending modulus from oriented membrane stacks

Author:

Himbert SebastianORCID,Gaboo Dorian,Brookes Emre,Nagle John F.,Rheinstädter Maikel C.ORCID

Abstract

An important mechanical property of cells is their membrane bending modulus, κ. Here, we introduce MEDUSA (MEmbrane DiffUse Scattering Analysis), a cloud-based analysis tool to determine the bending modulus, κ, from the analysis of X-ray diffuse scattering. MEDUSA uses GPU (graphics processing unit) accelerated hardware and a parallelized algorithm to run the calculations efficiently in a few seconds. MEDUSA’s graphical user interface allows the user to upload 2-dimensional data collected from different sources, perform background subtraction and distortion corrections, select regions of interest, run the fitting procedure and output the fitted parameters, the membranes’ bending modulus κ, and compressional modulus B.

Funder

Natural Sciences and Engineering Research Council of Canada

Canada Foundation for Innovation

Ontario Ministry of Research and Innovation

H.G Thode Fellowship

Early Research Award of the Province of Ontario and McMaster University

National Institute of General Medical Sciences

National Science Foundation

jetstream 2

EPSRC

Publisher

Public Library of Science (PLoS)

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