IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project-Reference-Cited by-同舟云学术

IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project

Published:2012-07-05 Issue:7 Volume:7 Page:e40151
ISSN:1932-6203
Container-title:PLoS ONE
language:en
Short-container-title:PLoS ONE

Author:

Markowitz Victor M.,Chen I-Min A.,Chu Ken,Szeto Ernest,Palaniappan Krishna,Jacob Biju,Ratner Anna,Liolios Konstantinos,Pagani Ioanna,Huntemann Marcel,Mavromatis Konstantinos,Ivanova Natalia N.,Kyrpides Nikos C.

Publisher

Public Library of Science (PLoS)

Subject

Multidisciplinary

Reference21 articles.

1. The DOE-JGI standard operating procedure for the annotations of metagenomes.;K Mavromatis,2011

2. IMG/M: the integrated metagenome data management and comparative analysis system, Nucleic Acid Res.;VM Markowitz,2012

3. CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats.;C Bland;BMC Bioinformatics,2007

4. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res.;TM Lowe,1997

5. Prodigal: prokaryotic gene recognition and translation initiation site identification, BMC Bioinformatics;D Hyatt,2010

Cited by 42 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Biological big-data sources, problems of storage, computational issues, and applications: a comprehensive review;Knowledge and Information Systems;2024-01-27

2. Cardiovascular diseases: pathophysiological role of gut microbiota and new targets for treatment and prevention;Experimental and Clinical Gastroenterology;2024-01-17

3. Identification and spatio-temporal tracking of ubiquitous phage families in the human microbiome;Frontiers in Microbiomes;2023-02-14

4. Developing whole cell standards for the microbiome field;Microbiome;2022-08-09

5. Metagenomics and artificial intelligence in the context of human health;Infection, Genetics and Evolution;2022-06