Rapid Microsatellite Identification from Illumina Paired-End Genomic Sequencing in Two Birds and a Snake-Reference-Cited by-同舟云学术

Rapid Microsatellite Identification from Illumina Paired-End Genomic Sequencing in Two Birds and a Snake

Published:2012-02-14 Issue:2 Volume:7 Page:e30953
ISSN:1932-6203
Container-title:PLoS ONE
language:en
Short-container-title:PLoS ONE

Author:

Castoe Todd A.,Poole Alexander W.,de Koning A. P. Jason,Jones Kenneth L.,Tomback Diana F.,Oyler-McCance Sara J.,Fike Jennifer A.,Lance Stacey L.,Streicher Jeffrey W.,Smith Eric N.,Pollock David D.

Publisher

Public Library of Science (PLoS)

Subject

Multidisciplinary

Reference20 articles.

1. Fast, cost-effective development of species-specific microsatellite markers by genomic sequencing.;J Abdelkrim;Biotechniques,2009

2. Identification of microsatellites from an extinct moa species using high-throughput (454) sequence data.;M Allentoft;Biotechniques,2009

3. QDD: a user-friendly program to select microsatellite markers and design primers from large sequencing projects.;E Meglecz;Bioinformatics,2010

4. msatcommander: detection of microsatellite repeat arrays and automated, locus-specific primer design.;BC Faircloth;Mol Ecol Resour,2008

5. Rapid identification of thousands of copperhead snake (Agkistrodon contortrix) microsatellite loci from modest amounts of 454 shotgun genome sequence.;TA Castoe;Mol Ecol Resour,2010

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