Robust Identification of Noncoding RNA from Transcriptomes Requires Phylogenetically-Informed Sampling-Reference-Cited by-同舟云学术

Robust Identification of Noncoding RNA from Transcriptomes Requires Phylogenetically-Informed Sampling

Published:2014-10-30 Issue:10 Volume:10 Page:e1003907
ISSN:1553-7358
Container-title:PLoS Computational Biology
language:en
Short-container-title:PLoS Comput Biol

Author:

Lindgreen Stinus,Umu Sinan Uğur,Lai Alicia Sook-Wei,Eldai Hisham,Liu Wenting,McGimpsey Stephanie,Wheeler Nicole E.,Biggs Patrick J.,Thomson Nick R.,Barquist Lars,Poole Anthony M.,Gardner Paul P.

Publisher

Public Library of Science (PLoS)

Subject

Computational Theory and Mathematics,Cellular and Molecular Neuroscience,Genetics,Molecular Biology,Ecology,Modelling and Simulation,Ecology, Evolution, Behavior and Systematics

Reference68 articles.

1. A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea;D Wu;Nature,2009

2. Insights into the phylogeny and coding potential of microbial dark matter;C Rinke;Nature,2013

3. High-throughput bacterial genome sequencing: an embarrassment of choice, a world of opportunity;NJ Loman;Nat Rev Microbiol,2012

4. Integrating genomics into the taxonomy and systematics of the Bacteria and Archaea;J Chun;Int J Syst Evol Microbiol,2014

5. Bacterial genomes: from regulatory complexity to engineering;R Sorek;Curr Opin Microbiol,2011

Cited by 43 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. RNA cis-regulators are important for Streptococcus pneumoniae in vivo success;PLOS Genetics;2024-03-05

2. Evaluation of the fitness benefit conferred by RNA cis-regulators toStreptococcus pneumoniaeduring infection;2023-12-08

3. High-Resolution Small RNAs Landscape Provides Insights into Alkane Adaptation in the Marine Alkane-Degrader Alcanivorax dieselolei B-5;International Journal of Molecular Sciences;2022-12-15

4. High-resolution small RNAs landscape provides insights into alkane adaptation in the marine alkane-degraderAlcanivorax dieseloleiB-5;2022-11-10

5. A Peroxide-Responding sRNA Evolved from a Peroxidase mRNA;Molecular Biology and Evolution;2022-01-27