Plasmidic resistance to colistin mediated by mcr-1 gene in Escherichia coli clinical isolates in Argentina: A retrospective study, 2012–2018

Author:

Faccone Diego1,Rapoport Melina1,Albornoz Ezequiel1,Celaya Federico1,De Mendieta Juan1,De Belder Denise2,Lucero Celeste1,Gomez Sonia2,Danze Diego1,Pasteran Fernando1,Corso Alejandra31,Mobilizable Colistin Resistance Group 4

Affiliation:

1. Antimicrobial Agents Division, National and Regional Reference Laboratory for Antimicrobial Resistance, National Institute on Infectious Diseases – ANLIS “Dr. Carlos G. Malbrán,” Buenos Aires, Argentina.

2. National Council on Scientific and Technical Research (CONICET), Buenos Aires, Argentina.

3. acorso@anlis.gob.ar

4. Members are listed in the Acknowledgement at the end of the article.

Abstract

Objective. To describe the resistance profile and the genetic characteristics of Escherichia coli isolates that harbor the mobilizable colistin resistance gene mcr-1 in Argentina.

Methods. This was a retrospective study of 192 E. coli isolates positive for mcr-1 obtained from 69 hospitals of Buenos Aires City and 14 Argentinean provinces in 2012 – 2018. The antimicrobial susceptibility was performed by agar diffusion, broth macrodilution, and/or agar dilution. Standard polymerase chain reaction (PCR) was performed to detect resistance genes and incompatibility groups; specific PCR was applied to discriminate between blaCTX-M allelic groups and mcr-1.5 variant. The genetic relatedness among isolates was evaluated by XbaI-pulsed field gel electrophoresis and multilocus sequence typing in a subset of isolates.

Results. All E. coli isolates showed minimal inhibitory concentrations to colistin = 4µg/mL; nearly 50% were resistant to third-generation cephalosporins, with CTX-M-2 being the main extended-spectrum β-lactamase detected. Five E. coli were carbapenemase-producers (3 NDM, 2 KPC). The mcr-1.5 variant was detected in 13.5% of the isolates. No genetic relationship was observed among the mcr-1-positive E. coli clinical isolates, but a high proportion (164/192; 85.4%) of IncI2 plasmids was detected.

Conclusions. The presence of IncI2 plasmids among highly diverse E. coli clones suggests that the mcr-1 gene’s wide distribution in Argentina may be driven by the horizontal transmission of IncI2 plasmids.

Publisher

Pan American Health Organization

Subject

Public Health, Environmental and Occupational Health

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