DFAST and DAGA: web-based integrated genome annotation tools and resources-Reference-Cited by-同舟云学术

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DFAST and DAGA: web-based integrated genome annotation tools and resources

Published:2016 Issue:4 Volume:35 Page:173-184
ISSN:2186-3342
Container-title:Bioscience of Microbiota, Food and Health
language:en
Short-container-title:

Author:

TANIZAWA Yasuhiro¹²,FUJISAWA Takatomo²,KAMINUMA Eli²,NAKAMURA Yasukazu²,ARITA Masanori²³

Affiliation:

1. Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Chiba 277-8561, Japan

2. Center for Information Biology, National Institute of Genetics, Shizuoka 411-8540, Japan

3. RIKEN Center for Sustainable Resource Science, Kanagawa 230-0045, Japan

Publisher

BMFH Press

Subject

Gastroenterology,Applied Microbiology and Biotechnology,Immunology,Microbiology,Food Science

Link

https://www.jstage.jst.go.jp/article/bmfh/35/4/35_16-003/_pdf

Reference49 articles.

1. 1. Cochrane G, Karsch-Mizrachi I, Takagi T, International Nucleotide Sequence Database Collaboration. 2016. The International Nucleotide Sequence Database Collaboration. Nucleic Acids Res 44 D1: D48–D50.

2. 2. Kodama Y, Shumway M, Leinonen R, International Nucleotide Sequence Database Collaboration. 2012. The Sequence Read Archive: explosive growth of sequencing data. Nucleic Acids Res 40: D54–D56.

3. 3. Nilsson RH, Ryberg M, Kristiansson E, Abarenkov K, Larsson KH, Kõljalg U. 2006. Taxonomic reliability of DNA sequences in public sequence databases: a fungal perspective. PLoS One 1: e59.

4. 4. Bull MJ, Marchesi JR, Vandamme P, Plummer S, Mahenthiralingam E. 2012. Minimum taxonomic criteria for bacterial genome sequence depositions and announcements. J Microbiol Methods 89: 18–21.

5. 5. Nakazato T, Ohta T, Bono H. 2013. Experimental design-based functional mining and characterization of high-throughput sequencing data in the sequence read archive. PLoS One 8: e77910.

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