Towards One Health surveillance of antibiotic resistance: characterisation and mapping of existing programmes in humans, animals, food and the environment in France, 2021

Author:

Collineau Lucie1ORCID,Bourély Clémence2,Rousset Léo341,Berger-Carbonne Anne5,Ploy Marie-Cécile6,Pulcini Céline789,Colomb-Cotinat Mélanie5

Affiliation:

1. University of Lyon, French Agency for Food, Environmental and Occupational Health & Safety (ANSES), Epidemiology and Surveillance Support Unit, Lyon, France

2. French Ministry of Agriculture and Food Sovereignty, General Directorate for Food, Animal Health Unit, Paris, France

3. VetAgro Sup, Marcy L’Etoile, France

4. Claude Bernard University Lyon 1, Lyon, France

5. Direction des maladies infectieuses, Santé Publique France, Saint-Maurice, France

6. Université de Limoges, INSERM, CHU Limoges, UMR 1092, Limoges, France

7. Université de Lorraine, APEMAC, Nancy, France

8. CHRU-Nancy, Université de Lorraine, Nancy, France

9. French Ministry for Health and prevention, Paris, France

Abstract

Background International organisations are calling for One Health approaches to tackle antimicrobial resistance. In France, getting an overview of the current surveillance system and its level of integration is difficult due to the diversity of surveillance programmes. Aim This study aimed to map and describe all French surveillance programmes for antibiotic resistance (ABR), antibiotic use (ABU) and antibiotic residues, in humans, animals, food and the environment, in 2021. Another objective was to identify integration points, gaps and overlaps in the system. Methods We reviewed the literature for surveillance programmes and their descriptions. To further characterise programmes found, semi-directed interviews were conducted with their coordinators. Results In total 48 programmes in the human (n = 35), animal (n = 12), food (n = 3) and/or the environment (n = 1) sectors were identified; 35 programmes focused on ABR, 14 on ABU and two on antibiotic residues. Two programmes were cross-sectoral. Among the 35 ABR programmes, 23 collected bacterial isolates. Bacteria most targeted were Escherichia coli (n = 17 programmes), Klebsiella pneumoniae (n = 13), and Staphylococcus aureus (n = 12). Extended-spectrum beta-lactamase-producing E. coli was monitored by most ABR programmes (15 of 35) in humans, animals and food, and is a good candidate for integrated analyses. ABU indicators were highly variable. Areas poorly covered were the environmental sector, overseas territories, antibiotic-resistant-bacterial colonisation in humans and ABU in companion animals. Conclusion The French surveillance system appears extensive but has gaps and is highly fragmented. We believe our mapping will interest policymakers and surveillance stakeholders. Our methodology may inspire other countries considering One Health surveillance of ABR.

Publisher

European Centre for Disease Control and Prevention (ECDC)

Subject

Virology,Public Health, Environmental and Occupational Health,Epidemiology

Reference36 articles.

1. Interagency coordination group on antimicrobial resistance. No time to wait: securing the future from drug-resistant infections - report to the Secretary-General of the United Nations 2019. New York: United Nations; 2019. Available from: https://news.un.org/en/story/2019/04/1037471

2. Global burden of bacterial antimicrobial resistance in 2019: a systematic analysis.;Lancet,2022

3. World Health Organization (WHO). Global action plan on antimicrobial resistance. Geneva: WHO; 2015. Available from: https://www.who.int/publications/i/item/9789241509763

4. European commission. A European One Health Action Plan against Antimicrobial Resistance (AMR). Brussels: European commission; 2023. Available from: https://health.ec.europa.eu/antimicrobial-resistance/eu-action-antimicrobial-resistance_en

5. European Centre for Disease Prevention and Control (ECDC). Antimicrobial resistance in the EU/EEA (EARS-Net) - Annual Epidemiological Report 2021. Stockholm: ECDC; 2022. Available from: https://www.ecdc.europa.eu/en/publications-data/surveillance-antimicrobial-resistance-europe-2021

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