An integrated study of threonine-pathway enzyme kinetics in Escherichia coli

Author:

CHASSAGNOLE Christophe1,RAÏS Badr1,QUENTIN Eric2,FELL David A.13,MAZAT Jean-Pierre1

Affiliation:

1. INSERM EMI 9929, University Victor Segalen Bordeaux 2, 146 rue Léo Saignat, 33076 Bordeaux, France

2. Département de Biochimie Médicale et Biologie Moléculaire, University Victor Segalen Bordeaux 2, 33076 Bordeaux, France

3. School of Biological and Molecular Sciences, Oxford Brookes University, Oxford OX3 0BP, U.K.

Abstract

We have determined the kinetic parameters of the individual steps of the threonine pathway from aspartate in Escherichia coli under a single set of experimental conditions chosen to be physiologically relevant. Our aim was to summarize the kinetic behaviour of each enzyme in a single tractable equation that takes into account the effect of the products as competitive inhibitors of the substrates in the forward reaction and also, when appropriate (e.g. near-equilibrium reactions), as substrates of the reverse reactions. Co-operative feedback inhibition by threonine and lysine was also included as necessary. We derived the simplest rate equations that describe the salient features of the enzymes in the physiological range of metabolite concentrations in order to incorporate them ultimately into a complete model of the threonine pathway, able to predict quantitatively the behaviour of the pathway under natural or engineered conditions.

Publisher

Portland Press Ltd.

Subject

Cell Biology,Molecular Biology,Biochemistry

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