Molecular insights of inhibition in sickle hemoglobin polymerization upon glutathionylation: hydrogen/deuterium exchange mass spectrometry and molecular dynamics simulation-based approach

Author:

Das Rajdeep1,Mitra Amrita1,Mitra Gopa1,Maity Dibyajyoti2,Bhat Vijay3,Pal Debnath4,Ross Cecil5,Kurpad Anura V.6,Mandal Amit Kumar1ORCID

Affiliation:

1. Clinical Proteomics Unit, Division of Molecular Medicine, St. John's Research Institute, St. John's National Academy of Health Sciences, Bangalore 560034, India

2. IISc Mathematics Initiative, Indian Institute of Science, Bangalore 560012, India

3. Manipal Hospital, Old Airport Road, Bangalore 560017, India

4. Bioinformatics Centre, Department of Computational & Data Sciences, Indian Institute of Science, Bangalore 560012, India

5. Department of Medicine, St. John's Medical College and Hospital, St. John's National Academy of Health Sciences, Bangalore 560034, India

6. Department of Physiology, St. John's Medical College, St. John's National Academy of Health Sciences, Bangalore 560034, India

Abstract

In sickle cell anemia, polymerization of hemoglobin in its deoxy state leads to the formation of insoluble fibers that result in sickling of red blood cells. Stereo-specific binding of isopropyl group of βVal6, the mutated amino-acid residue of a tetrameric sickle hemoglobin molecule (HbS), with hydrophobic groove of another HbS tetramer initiates the polymerization. Glutathionylation of βCys93 in HbS was reported to inhibit the polymerization. However, the mechanism of inhibition in polymerization is unknown to date. In our study, the molecular insights of inhibition in polymerization were investigated by monitoring the conformational dynamics in solution phase using hydrogen/deuterium exchange-based mass spectrometry. The conformational rigidity imparted due to glutathionylation of HbS results in solvent shielding of βVal6 and perturbation in the conformation of hydrophobic groove of HbS. Additionally, molecular dynamics simulation trajectory showed that the stereo-specific localization of glutathione moiety in the hydrophobic groove across the globin subunit interface of tetrameric HbS might contribute to inhibition in polymerization. These conformational insights in the inhibition of HbS polymerization upon glutathionylation might be translated in the molecularly targeted therapeutic approaches for sickle cell anemia.

Publisher

Portland Press Ltd.

Subject

Cell Biology,Molecular Biology,Biochemistry

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