Genetic Architecture of Dilated Cardiomyopathy in Individuals of African and European Ancestry

Author:

Jordan Elizabeth12,Kinnamon Daniel D.12,Haas Garrie J.23,Hofmeyer Mark4,Kransdorf Evan5,Ewald Gregory A.6,Morris Alanna A.7,Owens Anjali8,Lowes Brian9,Stoller Douglas9,Tang W. H. Wilson10,Garg Sonia11,Trachtenberg Barry H.12,Shah Palak13,Pamboukian Salpy V.1415,Sweitzer Nancy K.1617,Wheeler Matthew T.18,Wilcox Jane E.19,Katz Stuart20,Pan Stephen21,Jimenez Javier22,Fishbein Daniel P.23,Smart Frank24,Wang Jessica25,Gottlieb Stephen S.26,Judge Daniel P.27,Moore Charles K.28,Mead Jonathan O.12,Hurst Natalie12,Cao Jinwen12,Huggins Gordon S.29,Cowan Jason12,Ni Hanyu12,Rehm Heidi L.30,Jarvik Gail P.3132,Vatta Matteo33,Burke Wylie34,Hershberger Ray E.123,

Affiliation:

1. Division of Human Genetics, Department of Internal Medicine, The Ohio State University, Columbus

2. Davis Heart and Lung Research Institute, The Ohio State University, Columbus

3. Division of Cardiovascular Medicine, Department of Internal Medicine, The Ohio State University, Columbus

4. MedStar Health Research Institute, MedStar Washington Hospital Center, Washington, DC

5. Smidt Heart Institute, Cedars-Sinai Medical Center, Los Angeles, California

6. Washington University, St Louis, Missouri

7. Emory University School of Medicine, Atlanta, Georgia

8. Center for Inherited Cardiovascular Disease, Division of Cardiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia

9. University of Nebraska Medical Center, Omaha

10. Cleveland Clinic, Cleveland, Ohio

11. University of Texas Southwestern Medical Center, Dallas

12. Houston Methodist DeBakey Heart and Vascular Center, J. C. Walter Jr Transplant Center, Houston, Texas

13. Inova Heart and Vascular Institute, Falls Church, Virginia

14. University of Alabama, Birmingham

15. Now with University of Washington, Seattle

16. Sarver Heart Center, University of Arizona, Tucson

17. Now with Washington University, St Louis, Missouri

18. Division of Cardiovascular Medicine, Stanford University School of Medicine, Stanford, California

19. Northwestern University Feinberg School of Medicine, Chicago, Illinois

20. New York University Langone Medical Center, New York, New York

21. Department of Cardiology, Westchester Medical Center and New York Medical College, Valhalla

22. Miami Cardiac and Vascular Institute, Baptist Health South, Miami, Florida

23. University of Washington, Seattle

24. Louisiana State University Health Sciences Center, New Orleans

25. University of California Los Angeles Medical Center, Los Angeles

26. University of Maryland School of Medicine, Baltimore

27. Medical University of South Carolina, Charleston

28. University of Mississippi Medical Center, Jackson

29. Cardiology Division, Tufts Medical Center and Tufts University School of Medicine, Boston, Massachusetts

30. Center for Genomic Medicine, Massachusetts General Hospital, Boston

31. Division of Medical Genetics, Department of Medicine, University of Washington, Seattle

32. Department of Genome Sciences, University of Washington, Seattle

33. Departments of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis

34. Department of Bioethics and Humanities, University of Washington, Seattle

Abstract

ImportanceBlack patients with dilated cardiomyopathy (DCM) have increased familial risk and worse outcomes than White patients, but most DCM genetic data are from White patients.ObjectiveTo compare the rare variant genetic architecture of DCM by genomic ancestry within a diverse population of patients with DCM.DesignCross-sectional study enrolling patients with DCM who self-identified as non-Hispanic Black, Hispanic, or non-Hispanic White from June 7, 2016, to March 15, 2020, at 25 US advanced heart failure programs. Variants in 36 DCM genes were adjudicated as pathogenic, likely pathogenic, or of uncertain significance.ExposurePresence of DCM.Main Outcomes and MeasuresVariants in DCM genes classified as pathogenic/likely pathogenic/uncertain significance and clinically actionable (pathogenic/likely pathogenic).ResultsA total of 505, 667, and 26 patients with DCM of predominantly African, European, or Native American genomic ancestry, respectively, were included. Compared with patients of European ancestry, a lower percentage of patients of African ancestry had clinically actionable variants (8.2% [95% CI, 5.2%-11.1%] vs 25.5% [95% CI, 21.3%-29.6%]), reflecting the lower odds of a clinically actionable variant for those with any pathogenic variant/likely pathogenic variant/variant of uncertain significance (odds ratio, 0.25 [95% CI, 0.17-0.37]). On average, patients of African ancestry had fewer clinically actionable variants in TTN (difference, −0.09 [95% CI, −0.14 to −0.05]) and other genes with predicted loss of function as a disease-causing mechanism (difference, −0.06 [95% CI, −0.11 to −0.02]). However, the number of pathogenic variants/likely pathogenic variants/variants of uncertain significance was more comparable between ancestry groups (difference, −0.07 [95% CI, −0.22 to 0.09]) due to a larger number of non-TTN non–predicted loss of function variants of uncertain significance, mostly missense, in patients of African ancestry (difference, 0.15 [95% CI, 0.00-0.30]). Published clinical case-based evidence supporting pathogenicity was less available for variants found only in patients of African ancestry (P < .001).Conclusion and RelevancePatients of African ancestry with DCM were less likely to have clinically actionable variants in DCM genes than those of European ancestry due to differences in genetic architecture and a lack of representation of African ancestry in clinical data sets.

Publisher

American Medical Association (AMA)

Subject

General Medicine

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