Rare and Common Genetic Variation Underlying Atrial Fibrillation Risk

Author:

Vad Oliver B.12,Monfort Laia M.12,Paludan-Müller Christian12,Kahnert Konstantin2,Diederichsen Søren Z.1,Andreasen Laura12,Lotta Luca A.3,Nielsen Jonas B.3,Lundby Alicia2,Svendsen Jesper H.14,Olesen Morten S.12, ,Baras Aris5,Abecasis Gonçalo5,Ferrando Adolfo5,Cantor Michael5,Coppola Giovanni5,Deubler Andrew5,Economides Aris5,Lotta Luca A5,Overton John D5,Reid Jeffrey G5,Shuldiner Alan5,Siminovitch Katherine5,Portnoy Jason5,Jones Marcus B5,Mitnaul Lyndon5,Fenney Alison5,Marchini Jonathan5,Ferreira Manuel AR5,Ghoussaini Maya5,Nafde Mona5,Salerno William5,Beechert Christina5,Brian Erin D5,Cremona Laura M5,Du Hang5,Forsythe Caitlin5,Gu Zhenhua5,Guevara Kristy5,Lattari Michael5,Lopez Alexander5,Manoochehri Kia5,Challa Prathyusha5,Pradhan Manasi5,Reynoso Raymond5,Schiavo Ricardo5,Padilla Maria S5,Wang Chenggu5,Wolf Sarah E5,Averitt Amelia5,Banerjee Nilanjana5,Li Dadong5,Malhotra Sameer5,Mower Justin5,Sarwar Mudasar5,Sharma Deepika5,Staples Jeffrey C5,Yu Sean5,Zhang Aaron5,Aqeel Muhammad5,Mitra George5,Gokhale Sujit5,Bunyea Andrew5,Punuru Krishna P5,Sreeram Sanjay5,Eom Gisu5,Sultan Benjamin5,Lanche Rouel5,Mahajan Vrushali5,Austin Eliot5,O'Keeffe Sean5,Panea Razvan5,Polanco Tommy5,Rasool Ayesha5,Bai Xiaodong5,Zhang Lance5,Boutkov Boris5,Edelstein Evan5,Gorovits Alexander5,Guan Ju5,Habegger Lukas5,Hawes Alicia5,Krasheninina Olga5,Zarate Samantha5,Mansfield Adam J5,Maxwell Evan K5,Balasubramanian Suganthi5,Bao Suying5,Sun Kathie5,Zhang Chuanyi5,Karuppaiya Vikhna Raj Kumar5,Backman Joshua5,Burch Kathy5,Campos Adrian5,Chen Lei5,Choi Sam5,Damask Amy5,Ganel Liron5,Gaynor Sheila5,Geraghty Benjamin5,Ghosh Arkopravo5,Martinez Salvador R5,Gillies Christopher5,Gurski Lauren5,Herman Joseph5,Jorgenson Eric5,Joseph Tyler5,Kessler Michael5,Kosmicki Jack5,Lin Nan5,Locke Adam5,Nakka Priyanka5,Landheer Karl5,Delaneau Olivier5,Marcketta Anthony5,Mbatchou Joelle5,Moscati Arden5,Pandey Aditeya5,Pandit Anita5,Paulding Charles5,Ross Jonathan5,Sidore Carlo5,Stahl Eli5,Suciu Maria5,Thornton Timothy5,VandeHaar Peter5,Vedantam Sailaja5,Vrieze Scott5,Zhang Jingning5,Wang Rujin5,Wu Kuan-Han5,Ye Bin5,Zhang Blair5,Ziyatdinov Andrey5,Zou Yuxin5,Watanabe Kyoko5,Tang Mira5,Wendt Frank5,Hobbs Brian5,Silver Jon5,Palmer William5,Guerreiro Rita5,Joshi Amit5,Baldassari Antoine5,Willer Cristen5,Graham Sarah5,Mayerhofer Ernst5,Haas Mary5,Verweij Niek5,Hindy George5,Bovijn Jonas5,De Tanima5,Akbari Parsa5,Sun Luanluan5,Sosina Olukayode5,Gilly Arthur5,Dornbos Peter5,Rodriguez-Flores Juan5,Riaz Moeen5,Kapoor Manav5,Tzoneva Gannie5,Jallow Momodou W5,Alkelai Anna5,Ayer Ariane5,Rajagopal Veera5,Gelfman Sahar5,Kumar Vijay5,Otto Jacqueline5,Parikshak Neelroop5,Guvenek Aysegul5,Bras Jose5,Alvarez Silvia5,Brown Jessie5,He Jing5,Khiabanian Hossein5,Revez Joana5,Skead Kimberly5,Zavala Valentina5,Sul Jae S5,Chen Esteban5,LeBlanc Michelle G5,Mighty Jason5,Nishtala Nirupama5,Rana Nadia5,Rico-Varela Jennifer5,Hernandez Jaimee5,Schwartz Randi5,Hankins Jody5,Hart Samuel5,Perez-Beals Ann5,Solari Gina5,Rivera-Picart Johannie5,Pagan Michelle5,Siceron Sunilbe5,Buchanan Adam5,Carey David J.5,Martin Christa L.5,Meyer Michelle5,Retterer Kyle5,Rolston David5

Affiliation:

1. Department of Cardiology, The Heart Centre, Copenhagen University Hospital – Rigshospitalet, Copenhagen, Denmark

2. Department of Biomedical Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark

3. Regeneron Genetics Center, Tarrytown, New York

4. Department of Clinical Medicine, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark

5. for the Geisinger MyCode Community Health Initiative and the Regeneron Genetics Center (RGC) Research Team

Abstract

ImportanceAtrial fibrillation (AF) has a substantial genetic component. The importance of polygenic risk is well established, while the contribution of rare variants to disease risk warrants characterization in large cohorts.ObjectiveTo identify rare predicted loss-of-function (pLOF) variants associated with AF and elucidate their role in risk of AF, cardiomyopathy (CM), and heart failure (HF) in combination with a polygenic risk score (PRS).Design, Setting, and ParticipantsThis was a genetic association and nested case-control study. The impact of rare pLOF variants was evaluated on the risk of incident AF. HF and CM were assessed in cause-specific Cox regressions. End of follow-up was July 1, 2022. Data were analyzed from January to October 2023. The UK Biobank enrolled 502 480 individuals aged 40 to 69 years at inclusion in the United Kingdom between March 13, 2006, and October 1, 2010. UK residents of European ancestry were included. Individuals with prior diagnosis of AF were excluded from analyses of incident AF.ExposuresRare pLOF variants and an AF PRS.Main Outcomes and MeasuresRisk of AF and incident HF or CM prior to and subsequent to AF diagnosis.ResultsA total of 403 990 individuals (218 489 [54.1%] female) with a median (IQR) age of 58 (51-63) years were included; 24 447 were diagnosed with incident AF over a median (IQR) follow-up period of 13.3 (12.4-14.0) years. Rare pLOF variants in 6 genes (TTN, RPL3L, PKP2, CTNNA3, KDM5B, and C10orf71) were associated with AF. Of these, TTN, RPL3L, PKP2, CTNNA3, and KDM5B replicated in an external cohort. Combined with high PRS, rare pLOF variants conferred an odds ratio of 7.08 (95% CI, 6.03-8.28) for AF. Carriers with high PRS also had a substantial 10-year risk of AF (16% in female individuals and 24% in male individuals older than 60 years). Rare pLOF variants were associated with increased risk of CM both prior to AF (hazard ratio [HR], 3.13; 95% CI, 2.24-4.36) and subsequent to AF (HR, 2.98; 95% CI, 1.89-4.69).Conclusions and RelevanceRare and common genetic variation were associated with an increased risk of AF. The findings provide insights into the genetic underpinnings of AF and may aid in future genetic risk stratification.

Publisher

American Medical Association (AMA)

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