The E3 ligase TRIM1 ubiquitinates LRRK2 and controls its localization, degradation, and toxicity

Author:

Stormo Adrienne E.D.1ORCID,Shavarebi Farbod2ORCID,FitzGibbon Molly2,Earley Elizabeth M.1,Ahrendt Hannah2,Lum Lotus S.1ORCID,Verschueren Erik34ORCID,Swaney Danielle L.34,Skibinski Gaia56,Ravisankar Abinaya56ORCID,van Haren Jeffrey78ORCID,Davis Emily J.1ORCID,Johnson Jeffrey R.34,Von Dollen John34ORCID,Balen Carson2,Porath Jacob2,Crosio Claudia9,Mirescu Christian10,Iaccarino Ciro9ORCID,Dauer William T.111213ORCID,Nichols R. Jeremy14,Wittmann Torsten7ORCID,Cox Timothy C.1516ORCID,Finkbeiner Steve171856ORCID,Krogan Nevan J.346ORCID,Oakes Scott A.119,Hiniker Annie2ORCID

Affiliation:

1. Departments of Pathology, University of California San Francisco, San Francisco, CA

2. Department of Pathology, University of California San Diego, San Diego, CA

3. Departments of Cellular and Molecular Pharmacology, University of California San Francisco, San Francisco, CA

4. Quantitative Biosciences Institute, University of California San Francisco, San Francisco, CA

5. Taube/Koret Center for Neurodegenerative Disease Research, J. David Gladstone Institutes, San Francisco, CA

6. Center for Systems and Therapeutics, J. David Gladstone Institutes, San Francisco, CA

7. Departments of Cell and Tissue Biology, University of California San Francisco, San Francisco, CA

8. Department of Cell Biology, Erasmus MC, Rotterdam, The Netherlands

9. Department of Biomedical Sciences, University of Sassari, Sassari, Italy

10. Neuroscience, Merck & Co. Inc., Boston, MA

11. Departments of Neurology and Neurotherapeutics, University of Texas Southwestern Medical Center, Dallas, TX

12. Neuroscience, University of Texas Southwestern Medical Center, Dallas, TX

13. Peter O’Donnell Jr. Brain Institute, University of Texas Southwestern Medical Center, Dallas, TX

14. Department of Pathology, Stanford University, Palo Alto, CA

15. Department of Oral and Craniofacial Sciences, School of Medicine, University of Missouri Kansas City, Kansas City, MO

16. School of Dentistry and Department of Pediatrics, School of Medicine, University of Missouri Kansas City, Kansas City, MO

17. Departments of Neurology, University of California San Francisco, San Francisco, CA

18. Departments of Physiology, University of California San Francisco, San Francisco, CA

19. Department of Pathology, University of Chicago, Chicago, IL

Abstract

Missense mutations in leucine-rich repeat kinase 2 (LRRK2) are the most common cause of familial Parkinson’s disease (PD); however, pathways regulating LRRK2 subcellular localization, function, and turnover are not fully defined. We performed quantitative mass spectrometry–based interactome studies to identify 48 novel LRRK2 interactors, including the microtubule-associated E3 ubiquitin ligase TRIM1 (tripartite motif family 1). TRIM1 recruits LRRK2 to the microtubule cytoskeleton for ubiquitination and proteasomal degradation by binding LRRK2911–919, a nine amino acid segment within a flexible interdomain region (LRRK2853–981), which we designate the “regulatory loop” (RL). Phosphorylation of LRRK2 Ser910/Ser935 within LRRK2 RL influences LRRK2’s association with cytoplasmic 14-3-3 versus microtubule-bound TRIM1. Association with TRIM1 modulates LRRK2’s interaction with Rab29 and prevents upregulation of LRRK2 kinase activity by Rab29 in an E3-ligase–dependent manner. Finally, TRIM1 rescues neurite outgrowth deficits caused by PD-driving mutant LRRK2 G2019S. Our data suggest that TRIM1 is a critical regulator of LRRK2, controlling its degradation, localization, binding partners, kinase activity, and cytotoxicity.

Funder

UCSF Parnassus Flow Cytometry Core

DRC Center

Michael J Fox Foundation

Taube Koret Center

Laurel Endowment

Stowers Family Endowed Chair for Dental & Mineralized Tissue Research

Fondazione Banco di Sardegna

Fondo di Ateneo per la Ricerca

National Institutes of Health

DoD

American Federation for Aging Research

Publisher

Rockefeller University Press

Subject

Cell Biology

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