Imaging of native transcription factors and histone phosphorylation at high resolution in live cells

Author:

Conic Sascha1234,Desplancq Dominique5,Ferrand Alexia6ORCID,Fischer Veronique1234,Heyer Vincent1234,Reina San Martin Bernardo1234,Pontabry Julien12347,Oulad-Abdelghani Mustapha1234,Babu N. Kishore8,Wright Graham D.9ORCID,Molina Nacho1234,Weiss Etienne5,Tora László12348ORCID

Affiliation:

1. Institut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch, France

2. Centre National de la Recherche Scientifique, UMR7104, Illkirch, France

3. Institut National de la Santé et de la Recherche Médicale, U964, Illkirch, France

4. Université de Strasbourg, Illkirch, France

5. Institut de Recherche de l’ESBS, UMR 7242, Illkirch, France

6. Imaging Core Facility, Biozentrum, University of Basel, Basel, Switzerland

7. Helmholtz Zentrum München, Deutsches Forschungszentrum für Gesundheit und Umwelt (GmbH), Institute of Epigenetics and Stem Cells, München, Germany

8. School of Biological Sciences, Nanyang Technological University, Singapore

9. Institute of Medical Biology, A*STAR, Singapore, Singapore

Abstract

Fluorescent labeling of endogenous proteins for live-cell imaging without exogenous expression of tagged proteins or genetic manipulations has not been routinely possible. We describe a simple versatile antibody-based imaging approach (VANIMA) for the precise localization and tracking of endogenous nuclear factors. Our protocol can be implemented in every laboratory allowing the efficient and nonharmful delivery of organic dye-conjugated antibodies, or antibody fragments, into different metazoan cell types. Live-cell imaging permits following the labeled probes bound to their endogenous targets. By using conventional and super-resolution imaging we show dynamic changes in the distribution of several nuclear transcription factors (i.e., RNA polymerase II or TAF10), and specific phosphorylated histones (γH2AX), upon distinct biological stimuli at the nanometer scale. Hence, considering the large panel of available antibodies and the simplicity of their implementation, VANIMA can be used to uncover novel biological information based on the dynamic behavior of transcription factors or posttranslational modifications in the nucleus of single live cells.

Funder

Conseil National de la Recherche Scientifique

Institut national de la santé et de la rechrche médicale

Université de Strasbourg

Ligue Contre le Cancer

European Research Council

Agence Nationale de la Recherche

Investissements d’Avenir

Agency for Science, Technology, and Research

Publisher

Rockefeller University Press

Subject

Cell Biology

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