Structure–function insights into direct lipid transfer between membranes by Mmm1–Mdm12 of ERMES

Author:

Kawano Shin1234,Tamura Yasushi456ORCID,Kojima Rieko6,Bala Siqin3ORCID,Asai Eri3,Michel Agnès H.7,Kornmann Benoît7ORCID,Riezman Isabelle8,Riezman Howard8ORCID,Sakae Yoshitake9,Okamoto Yuko9,Endo Toshiya121034ORCID

Affiliation:

1. Faculty of Life Sciences, Kyoto Sangyo University, Kyoto, Japan

2. Japan Science and Technology Agency/Core Research for Evolutional Science and Technology, Kyoto Sangyo University, Kyoto, Japan

3. Department of Chemistry, Graduate School of Science, Nagoya University, Nagoya, Japan

4. Japan Science and Technology Agency/Core Research for Evolutional Science and Technology, Nagoya University, Nagoya, Japan

5. Research Center for Materials Science, Nagoya University, Nagoya, Japan

6. Department of Material and Biological Chemistry, Faculty of Science, Yamagata University, Yamagata, Japan

7. Institute of Biochemistry, ETH Zürich, Zürich, Switzerland

8. Department of Biochemistry, National Centre of Competence in Research Chemical Biology, University of Geneva, Geneva, Switzerland

9. Department of Physics, Graduate School of Science, Nagoya University, Nagoya, Japan

10. Institute for Protein Dynamics, Kyoto Sangyo University, Kyoto, Japan

Abstract

The endoplasmic reticulum (ER)–mitochondrial encounter structure (ERMES) physically links the membranes of the ER and mitochondria in yeast. Although the ER and mitochondria cooperate to synthesize glycerophospholipids, whether ERMES directly facilitates the lipid exchange between the two organelles remains controversial. Here, we compared the x-ray structures of an ERMES subunit Mdm12 from Kluyveromyces lactis with that of Mdm12 from Saccharomyces cerevisiae and found that both Mdm12 proteins possess a hydrophobic pocket for phospholipid binding. However in vitro lipid transfer assays showed that Mdm12 alone or an Mmm1 (another ERMES subunit) fusion protein exhibited only a weak lipid transfer activity between liposomes. In contrast, Mdm12 in a complex with Mmm1 mediated efficient lipid transfer between liposomes. Mutations in Mmm1 or Mdm12 impaired the lipid transfer activities of the Mdm12–Mmm1 complex and furthermore caused defective phosphatidylserine transport from the ER to mitochondrial membranes via ERMES in vitro. Therefore, the Mmm1–Mdm12 complex functions as a minimal unit that mediates lipid transfer between membranes.

Funder

Japan Society of the Promotion of Science

Japan Science and Technology Agency

Core Research for Evolutional Science and Technology

Swiss National Science Foundation

National Centre of Competence in Research

Publisher

Rockefeller University Press

Subject

Cell Biology

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