The DKTK EXLIQUID consortium – exploiting liquid biopsies to advance cancer precision medicine for molecular tumor board patients

Author:

Mack Matthias12,Broche Julian34,George Stephen56,Hajjari Zahra78,Janke Florian910,Ranganathan Lavanya1112,Ashouri Mohammadreza12,Bleul Sabine1112,Desuki Alexander1314,Engels Cecilia156,Fliedner Stephanie M.J.16,Hartmann Nils1714,Hummel Michael156,Janning Melanie181920,Kiel Alexander2122,Köhler Thomas2122,Koschade Sebastian1423,Lablans Martin2122ORCID,Lambarki Mohamed2122,Loges Sonja181920,Lueong Smiths78,Meyer Sandra2414,Ossowski Stephan34,Scherer Florian1112,Schroeder Christopher34,Skowronek Patrick2122ORCID,Thiede Christian2526,Uhl Barbara2414,Vehreschild Jörg Janne2414,von Bubnoff Nikolas16,Wagner Sebastian1423,Werner Tamara V.2712,Westphalen C. Benedikt282,Fresser Patrizia12,Sültmann Holger910,Tinhofer Ingeborg56,Winter Christof12ORCID

Affiliation:

1. School of Medicine , Institute of Clinical Chemistry and Pathobiochemistry, Technical University of Munich , Munich , Germany

2. German Cancer Consortium (DKTK), Partner Site Munich , German Cancer Research Center (DKFZ) , Heidelberg , Germany

3. Institute of Medical Genetics and Applied Genomics, University of Tübingen , Tübingen , Germany

4. German Cancer Consortium (DKTK), Partner Site Tübingen , German Cancer Research Center (DKFZ) , Heidelberg , Germany

5. Department of Radiooncology and Radiotherapy , Charité University Hospital Berlin , Berlin , Germany

6. German Cancer Consortium (DKTK), Partner Site Berlin , German Cancer Research Center (DKFZ) , Heidelberg , Germany

7. West German Cancer Center , Bridge Institute of Experimental Tumor Therapy, University Hospital Essen , Essen , Germany

8. German Cancer Consortium (DKTK), Partner Site Essen/Düsseldorf , German Cancer Research Center (DKFZ) , Heidelberg , Germany

9. Division of Cancer Genome Research , German Cancer Research Center (DKFZ) , Heidelberg , Germany

10. German Cancer Consortium (DKTK) , Heidelberg , Germay

11. Department of Medicine I , Medical Center – University of Freiburg , Freiburg , Germany

12. German Cancer Consortium (DKTK), Partner Site Freiburg , German Cancer Research Center (DKFZ) , Heidelberg , Germany

13. University Cancer Center (UCT), University Medical Center of the Johannes Gutenberg-University Mainz , Mainz , Germany

14. German Cancer Consortium (DKTK), Partner Site Frankfurt/Mainz , German Cancer Research Center (DKFZ) , Heidelberg , Germany

15. Charité University Hospital Berlin , Berlin , Germany

16. University Cancer Center Schleswig-Holstein, University Medical Center Schleswig-Holstein , Kiel/Lübeck , Germany

17. Institute of Pathology, University Medical Center JGU Mainz , Mainz , Germany

18. DKFZ-Hector Cancer Institute at the University Medical Center Mannheim , Mannheim , Germany

19. Division of Personalized Medical Oncology (A420) , German Cancer Research Center (DKFZ) , Heidelberg , Germany

20. Department of Personalized Oncology, Medical Faculty Mannheim , University Hospital Mannheim, University of Heidelberg , Mannheim , Germany

21. Complex Data Processing in Medical Informatics , University Medical Center Mannheim , Mannheim , Germany

22. German Cancer Consortium (DKTK); and Federated Information Systems , German Cancer Research Center (DKFZ) , Heidelberg , Germany

23. Department of Medicine, Hematology/Oncology , Goethe University , Frankfurt , Germany

24. University Hospital Frankfurt , Frankfurt , Germany

25. Department of Medicine I , University Hospital Carl Gustav Carus , Dresden , Germany

26. German Cancer Consortium (DKTK), Partner Site Dresden , German Cancer Research Center (DKFZ) , Heidelberg , Germany

27. Medical Center, Medical Faculty , Institute for Surgical Pathology, University of Freiburg , Freiburg , Germany

28. Comprehensive Cancer Center Munich & Department of Medicine III , Ludwig Maximilian University of Munich , Munich , Germany

Abstract

Abstract Testing for genetic alterations in tumor tissue allows clinicians to identify patients who most likely will benefit from molecular targeted treatment. EXLIQUID – exploiting liquid biopsies to advance cancer precision medicine – investigates the potential of additional non-invasive tools for guiding therapy decisions and monitoring of advanced cancer patients. The term “liquid biopsy” (LB) refers to non-invasive analysis of tumor-derived circulating material such as cell-free DNA in blood samples from cancer patients. Although recent technological advances allow sensitive and specific detection of LB biomarkers, only few LB assays have entered clinical routine to date. EXLIQUID is a German Cancer Consortium (DKTK)-wide joint funding project that aims at establishing LBs as a minimally-invasive tool to analyze molecular changes in circulating tumor DNA (ctDNA). Here, we present the structure, clinical aim, and methodical approach of the new DKTK EXLIQUID consortium. Within EXLIQUID, we will set up a multicenter repository of high-quality LB samples from patients participating in DKTK MASTER and local molecular tumor boards, which use molecular profiles of tumor tissues to guide targeted therapies. We will develop LB assays for monitoring of therapy efficacy by the analysis of tumor mutant variants and tumor-specific DNA methylation patterns in ctDNA from these patients. By bringing together LB experts from all DKTK partner sites and exploiting the diversity of their particular expertise, complementary skills and technologies, the EXLIQUID consortium addresses the challenges of translating LBs into the clinic. The DKTK structure provides EXLIQUID a unique position for the identification of liquid biomarkers even in less common tumor types, thereby extending the group of patients benefitting from non-invasive LB testing. Besides its scientific aims, EXLIQUID is building a valuable precision oncology cohort and LB platform which will be available for future collaborative research studies within the DKTK and beyond.

Publisher

Walter de Gruyter GmbH

Subject

Biochemistry (medical),Clinical Biochemistry,Discrete Mathematics and Combinatorics

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