Study of L-tryptophan (a neurotransmitter precursor): spectral, Hirshfeld surface, molecular docking and dynamics simulations

Author:

Fatima Aysha1,Kumar Anuj2,Saral Abdul Kadar Avuliya3,Muthu Sambantham4,Afzal Mohd5,Haq Nazrul6,Nazar Imran7,Siddiqui Nazia8,Javed Saleem9

Affiliation:

1. S.O.S in Chemistry , Jiwaji University , Gwalior , 474011 , M.P. , India

2. Department of Chemistry , Indian Institute of Technology, Bombay , Mumbai , 400076 , India

3. Department of Chemistry , Panimalar Engineering College , Chennai 600123 , Tamilnadu , India

4. Department of Physics , Aringnar Anna Govt. Arts College , Cheyyar 604407 , India

5. Department of Chemistry, College of Science , King Saud University , Riyadh 11451 , Saudi Arabia

6. Department of Pharmaceutics, College of Pharmacy , King Saud University , Riyadh 11451 , Saudi Arabia

7. Virtual University , Lahore , Pakistan

8. Department of Chemistry , Dayalbagh Educational Institute , Agra , 282005 , U.P. , India

9. Department of Chemsitry , Jamia Millia Islamia , New Delhi , 110025 , Delhi , India

Abstract

Abstract This paper describes both theoretical and empirical studies on essential amino acids and the serotonin precursor L-tryptophan. To analyze the molecular structure, the FTIR technique 1H NMR, and ultraviolet–visible spectroscopy were performed. The current research used the DFT – B.3.L.Y.P/6-311++G(d,p) methodology to enhance an essential amino acid in the electronic ground state. The spectral studies of the chosen compound were analyzed in gaseous state and various solvent phases, and the outputs were then related with observed experimental information using the Time dependent-DFT methodology. NBO analysis was employed to determine the stabilization energies and electronic transitions. MEP and ELF analyses were accomplished to understand the chemically responsive regions of molecule. Thermodynamic functions of the title chemical are also known at various temperatures. 3D Hirshfeld surface studies and two-dimensional fingerprint images were utilized to offer a thorough explanation of the crystal surface’s interactions with other molecules. To investigate protein-ligand interactions, least binding energy was measured as −7.2 kcal mol−1 in molecular docking. L-Trp and its derivatives were also investigated for drug-likeness, and all substances were found to be of a comparable behavior. Precisely an outcome, this compound could be useful in the advancement of therapies.

Funder

King Saud University

Publisher

Walter de Gruyter GmbH

Subject

Physical and Theoretical Chemistry

Reference78 articles.

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2. Frazer, A., Hensler, J. G. Serotonin involvement in physiological function and behaviour. In Basic Neurochemistry: Molecular, Cellular and Medical Aspects, 6th ed.; Siegel, G. J., Agranoff, B. W., et al.., Eds. Lippincott-Raven: Philadelphia, Pa, USA, 1999.

3. Berger, M., Gray, J. A., Roth, B. L. The expanded biology of serotonin. Annu. Rev. Med. 2009, 60, 355–366; https://doi.org/10.1146/annurev.med.60.042307.110802.

4. Gingrich, J. A., Hen, R. Dissecting the role of the serotonin system in neuropsychiatric disorders using knockout mice. Psychopharmacology 2001, 155, 1–10; https://doi.org/10.1007/s002130000573.

5. Whitaker-Azmitia, P. M. Serotonin and brain development: role in human developmental diseases. Brain Res. Bull. 2001, 56, 479–485; https://doi.org/10.1016/s0361-9230(01)00615-3.

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