Relative dielectric constants and selectivity ratios in open ionic channels

Author:

Eisenberg Bob1,Liu Weishi2

Affiliation:

1. 1Department of Molecular Biophysics and Physiology, Rush Medical Center, 1759 Harrison St., Chicago, Illinois 60612, USA

2. 2Department of Mathematics, University of Kansas, 1460 Jayhawk Blvd., Room 405, Lawrence, Kansas 66045, USA

Abstract

Abstract We investigate the effects of the relative dielectric coefficient on ionic flows in open ion channels, using mathematical analysis of reasonably general Poisson-Nernst-Planck type models that can include the finite sizes of ions. The value of the relative dielectric coefficient is of course a crucial parameter for ionic behavior in general. Using the powerful theory of singularly perturbed problems in applied mathematics, we show that some properties of open channels are quite insensitive to variation in the relative dielectric coefficient, thereby explaining such effects seen unexpectedly in simulations. The ratio between the total number of one ion species and that of another ion species, and the ratio between the flux of one ion species and that of another ion species do not depend significantly on the relative dielectric coefficient.

Publisher

Walter de Gruyter GmbH

Subject

Applied Mathematics,Computational Mathematics,Mathematical Physics,Molecular Biology,Biophysics

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