Microchip-Based Terminal Restriction Fragment Length Polymorphism for On-Site Analysis of Bacterial Communities in Freshwater

Author:

Yamaguchi Nobuyasu1,Matsukawa Syuhei1,Shintome Yoko1,Ichijo Tomoaki1,Nasu Masao1

Affiliation:

1. Graduate School of Pharmaceutical Sciences, Osaka University

Publisher

Pharmaceutical Society of Japan

Subject

Pharmaceutical Science,Pharmacology,General Medicine

Reference21 articles.

1. 1) Baba T, Matsumoto R, Yamaguchi N, Nasu M. Bacterial population dynamics in a reverse-osmosis water purification system determined by fluorescent staining and PCR-denaturing gradient gel electrophoresis. Microbes Environ., 24, 163–167 (2009).

2. 2) Sakamoto C, Yamaguchi N, Yamada M, Nagase H, Seki M, Nasu M. Rapid quantification of bacterial cells in potable water using a simplified microfluidic device. J. Microbiol. Methods, 68, 643–647 (2007).

3. 3) Yamaguchi N, Torii M, Uebayashi Y, Nasu M. Rapid, semiautomated quantification of bacterial cells in freshwater by using a microfluidic device for on-chip staining and counting. Appl. Environ. Microbiol., 77, 1536–1539 (2011).

4. 4) Liu WT, Marsh TL, Cheng H, Forney LJ. Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA. Appl. Environ. Microbiol., 63, 4516–4522 (1997).

5. 5) Schwarz JI, Eckert W, Conrad R. Community structure of Archaea and Bacteria in a profundal lake sediment Lake Kinneret (Israel). Syst. Appl. Microbiol., 30, 239–254 (2007).

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