Inclusion of database outgroups reduces false positives in fungal metabarcoding taxonomic assignments-Reference-Cited by-同舟云学术

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Inclusion of database outgroups reduces false positives in fungal metabarcoding taxonomic assignments

Published:2023-05-17 Issue:4 Volume:115 Page:571-577
ISSN:0027-5514
Container-title:Mycologia
language:en
Short-container-title:Mycologia

Author:

Rawson Clayton¹,Zahn Geoffrey¹^ORCID

Affiliation:

1. Department of Biology, Utah Valley University, 800 W University Parkway, SB243, Orem, Utah 84058

Funder

This work was supported by the Utah Valley University Scholarly Activities Committee

Publisher

Informa UK Limited

Subject

Cell Biology,Genetics,Molecular Biology,Physiology,Ecology, Evolution, Behavior and Systematics,General Medicine

Link

https://www.tandfonline.com/doi/pdf/10.1080/00275514.2023.2206931

Reference33 articles.

1. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

2. Great differences in performance and outcome of high-throughput sequencing data analysis platforms for fungal metabarcoding

3. ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases

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1. The impact of stone position and location on the microbiome of a marble statue;The Microbe;2024-03

2. The UNITE database for molecular identification and taxonomic communication of fungi and other eukaryotes: sequences, taxa and classifications reconsidered;Nucleic Acids Research;2023-11-11

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