Differences in biochemical properties of two 5′-nucleotidases from deep- and shallow-sea Shewanella species under various harsh conditions

Author:

Fujimori Kiko1,Fujii Sotaro1,Lisdiana Lisa12,Wakai Satoshi3,Yagi Hisashi45,Sambongi Yoshihiro1

Affiliation:

1. Graduate School of Biosphere Science, Hiroshima University, Higashi-Hiroshima, Japan

2. Department of Biology, Universitas Negeri Surabaya, Kampus Unesa Ketintang, Surabaya, Indonesia

3. Graduate School of Science, Technology, and Innovation, Kobe University, Kobe, Japan

4. Department of Chemistry and Biotechnology, Graduate School of Sustainability Science, Tottori University, Tottori, Japan

5. Center for Research on Green Sustainable Chemistry, Tottori University, Tottori, Japan

Abstract

ABSTRACT Deep-sea Shewanella violacea 5′-nucleotidase (SVNTase) activity exhibited higher NaCl tolerance than that of a shallow-sea Shewanella amazonensis homologue (SANTase), the sequence identity between them being 70.4%. Here, SVNTase exhibited higher activity than SANTase with various inorganic salts, similar to the difference in their NaCl tolerance. In contrast, SVNTase activity decreased with various organic solvents, while SANTase activity was retained with the same concentrations of the solvents. Therefore, SVNTase is more robust than SANTase with inorganic salts, but more vulnerable with organic solvents. As to protein stability, SANTase was more stable against organic solvents and heat than SVNTase, which correlated with the differences in their enzymatic activities. We also found that SANTase retained higher activity for three weeks than SVNTase did in the presence of glycerol. These findings will facilitate further application of these enzymes as appropriate biological catalysts under various harsh conditions. Abbreviations: NTase: 5′-nucleotidase; SANTase: Shewanella amazonensis 5′-nucleotidase; SVNTase: Shewanella violacea 5′-nucleotidase; CD: circular dichroism

Funder

Grants-in-Aid for Scientific Research from the Ministry of Education, Culture, Sports, Science and Technology of Japan

Publisher

Oxford University Press (OUP)

Subject

Organic Chemistry,Molecular Biology,Applied Microbiology and Biotechnology,General Medicine,Biochemistry,Analytical Chemistry,Biotechnology

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