Computational analysis of protein stability and allosteric interaction networks in distinct conformational forms of the SARS-CoV-2 spike D614G mutant: reconciling functional mechanisms through allosteric model of spike regulation-Reference-Cited by-同舟云学术

Computational analysis of protein stability and allosteric interaction networks in distinct conformational forms of the SARS-CoV-2 spike D614G mutant: reconciling functional mechanisms through allosteric model of spike regulation

Published:2021-06-01 Issue: Volume: Page:1-18
ISSN:0739-1102
Container-title:Journal of Biomolecular Structure and Dynamics
language:en
Short-container-title:Journal of Biomolecular Structure and Dynamics

Author:

Verkhivker Gennady M.¹²,Agajanian Steve¹,Oztas Deniz¹,Gupta Grace¹

Affiliation:

1. Keck Center for Science and Engineering, Schmid College of Science and Technology, Chapman University, Orange, CA, USA

2. Depatment of Biomedical and Pharmaceutical Sciences, Chapman University School of Pharmacy, Irvine, CA, USA

Publisher

Informa UK Limited

Subject

Molecular Biology,General Medicine,Structural Biology

Link

https://www.tandfonline.com/doi/pdf/10.1080/07391102.2021.1933594

Reference111 articles.

1. Atomistic Modeling of the ABL Kinase Regulation by Allosteric Modulators Using Structural Perturbation Analysis and Community-Based Network Reconstruction of Allosteric Communications

2. Dynamic View of Allosteric Regulation in the Hsp70 Chaperones by J-Domain Cochaperone and Post-Translational Modifications: Computational Analysis of Hsp70 Mechanisms by Exploring Conformational Landscapes and Residue Interaction Networks

3. Computational reconstruction of atomistic protein structures from coarse-grained models

4. Protocols for Fast Simulations of Protein Structure Flexibility Using CABS-Flex and SURPASS

5. Global Dynamics of Proteins: Bridging Between Structure and Function

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